RNA–Protein interactions for RNA: ENST00000607443.1

RNU4-89P-201, Transcript of RNA, U4 small nuclear 89, pseudogene, humanhuman

BASIC

Gene RNU4-89P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-89P-201ENST00000607443 MUTP22033 750 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 SP100P23497 879 aaPredicted RBP4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 MLH1P40692 756 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 SLC11A1P49279 550 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 GLUD2P49448 558 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 CACNA2D1P54289 1103 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 WNT3AP56704 352 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 PTENP60484 403 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 GRIK3Q13003 919 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 CAPSQ13938 189 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 KCNC3Q14003 757 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 PPP2R5AQ15172 486 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 ME3Q16798 604 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 PDXDC1Q6P996 788 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 CYP26C1Q6V0L0 522 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 C15orf39Q6ZRI6 1047 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 MRPL10Q7Z7H8 261 aaKnown RBP4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 XYLT1Q86Y38 959 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 NECAB1Q8N987 351 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 NSUN7Q8NE18 718 aaKnown RBP4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 VN1R2Q8NFZ6 395 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 C8orf76Q96K31 380 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 IFT74Q96LB3 600 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 ZSCAN31Q96LW9 406 aaPredicted RBP4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 LLPHQ9BRT6 129 aaKnown RBP4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 HERC2P3Q9BVR0 1158 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 COLEC11Q9BWP8 271 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 APOL6Q9BWW8 343 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 POLR3FQ9H1D9 316 aaPredicted RBP4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 S1PR5Q9H228 398 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 FOXP1Q9H334 677 aaPredicted RBP4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 POMKQ9H5K3 350 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 TUFT1Q9NNX1 390 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 PRMT7Q9NVM4 692 aaPredicted RBP4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 RGL1Q9NZL6 768 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 DNAJB4Q9UDY4 337 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 PRG3Q9Y2Y8 225 aaPredicted RBP4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 IPPQ9Y573 584 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 C2orf16Q68DN1 1984 aa4.56□□□□□ -1.68
RNU4-89P-201ENST00000607443 SF3B1O75533 1304 aaKnown RBP eCLIP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 MTCL1Q9Y4B5 1905 aaKnown RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 MYO15AQ9UKN7 3530 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 A0A0A6YYJ9 748 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 MARCH11A6NNE9 402 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 PRR5-ARHGAP8B1AHC4 643 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 C2CD4DB7Z1M9 353 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 LAD1O00515 517 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 MGST3O14880 152 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 TADA2AO75478 443 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 ALDH1A2O94788 518 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 CTDNEP1O95476 244 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 NPTXRO95502 500 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 ARF4P18085 180 aaPredicted RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 HOXA11P31270 313 aaPredicted RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 CCT6AP40227 531 aaKnown RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 TRAPPC10P48553 1259 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 RBM25P49756 843 aaKnown RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 CLCN4P51793 760 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 EFNA5P52803 228 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 OCA2Q04671 838 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 MBTD1Q05BQ5 628 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 ELAVL2Q12926 359 aaKnown RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 RESTQ13127 1097 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 PRPF4BQ13523 1007 aaKnown RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 MAPK6Q16659 721 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 USP41Q3LFD5 358 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 DCAF4L1Q3SXM0 396 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 LIN9Q5TKA1 542 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 PIK3R6Q5UE93 754 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 PRAMEF9Q5VWM5 478 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 SPATC1Q76KD6 591 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 GPR149Q86SP6 731 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 TMEM173Q86WV6 379 aaPredicted RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 ZNF280BQ86YH2 543 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 GPR65Q8IYL9 337 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 CMASQ8NFW8 434 aaPredicted RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 DEPTORQ8TB45 409 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 PIGOQ8TEQ8 1089 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 HDAC7Q8WUI4 952 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 AUTS2Q8WXX7 1259 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 KIFAP3Q92845 792 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 CPB2Q96IY4 423 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 KLHL5Q96PQ7 755 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 TUBGCP5Q96RT8 1024 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 GAD1Q99259 594 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 HSD17B14Q9BPX1 270 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 SOX7Q9BT81 388 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 POLR3CQ9BUI4 534 aaPredicted RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 NXF3Q9H4D5 531 aaKnown RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 PLEKHA4Q9H4M7 779 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 MINDY3Q9H8M7 445 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 UPF2Q9HAU5 1272 aaKnown RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 XPNPEP1Q9NQW7 623 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 MAN1C1Q9NR34 630 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 TOPORSQ9NS56 1045 aaPredicted RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 GJB4Q9NTQ9 266 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 WRAP73Q9P2S5 460 aaPredicted RBP4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 ADAM28Q9UKQ2 775 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 LIMCH1Q9UPQ0 1083 aa4.55□□□□□ -1.68
RNU4-89P-201ENST00000607443 MYH11P35749 1972 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms