RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 NPWQ8N729 165 aa13.29□□□□□ -0.28
SRGAP2-209ENST00000604247 DNAAF3Q8N9W5 541 aa13.29□□□□□ -0.28
SRGAP2-209ENST00000604247 SMG8Q8ND04 991 aaKnown RBP13.29□□□□□ -0.28
SRGAP2-209ENST00000604247 PPP4R1Q8TF05 950 aa13.29□□□□□ -0.28
SRGAP2-209ENST00000604247 MOCOSQ96EN8 888 aa13.29□□□□□ -0.28
SRGAP2-209ENST00000604247 CPNE1Q99829 537 aa13.29□□□□□ -0.28
SRGAP2-209ENST00000604247 SLC24A3Q9HC58 644 aa13.29□□□□□ -0.28
SRGAP2-209ENST00000604247 SORCS3Q9UPU3 1222 aa13.29□□□□□ -0.28
SRGAP2-209ENST00000604247 IPPQ9Y573 584 aa13.29□□□□□ -0.28
SRGAP2-209ENST00000604247 TSC2P49815 1807 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 LOC100653049A0A140TA62 436 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 MBLAC1A4D2B0 266 aaPredicted RBP13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 ARHGAP42A6NI28 874 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 ATP9BO43861 1147 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 KRT34O76011 436 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 USP1O94782 785 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 BAG2O95816 211 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 ATP5BP06576 529 aaKnown RBP13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 WARSP23381 471 aaKnown RBP13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 GRK2P25098 689 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 ABCE1P61221 599 aaKnown RBP13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 CDC42EP1Q00587 391 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 IRF9Q00978 393 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 HSP90AA5PQ58FG0 334 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 SPANXN3Q5MJ09 141 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 CERCAMQ5T4B2 595 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 GRTP1Q5TC63 336 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 C6orf163Q5TEZ5 329 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 NAPRTQ6XQN6 538 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 ACVR1CQ8NER5 493 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 SLC2A13Q96QE2 648 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 RBBP8Q99708 897 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 SIKE1Q9BRV8 207 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 ULBP1Q9BZM6 244 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 YIPF3Q9GZM5 350 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 MAN1C1Q9NR34 630 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 DLGAP2Q9P1A6 1054 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 VANGL2Q9ULK5 521 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 PPM1HQ9ULR3 514 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 SNX10Q9Y5X0 201 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 ZCWPW2A0A1B0GU75 182 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 XPOTO43592 962 aaKnown RBP13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 KLHL2O95198 593 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 TPH1P17752 444 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 NCF2P19878 526 aaPredicted RBP13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 CD68P34810 354 aaPredicted RBP13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 PGGT1BP53609 377 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 NAB1Q13506 487 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 PEX6Q13608 980 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 GPRIN1Q7Z2K8 1008 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 TMEM135Q86UB9 458 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 KCTD13Q8WZ19 329 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 LRRC40Q9H9A6 602 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 WDR6Q9NNW5 1121 aaKnown RBP13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 ACSS2Q9NR19 701 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 TMEM30AQ9NV96 361 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 UBP1Q9NZI7 540 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 FLRT1Q9NZU1 646 aa13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 TIMM13Q9Y5L4 95 aaPredicted RBP13.28□□□□□ -0.28
SRGAP2-209ENST00000604247 MEIS3P2A8K0S8 358 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 GOLGA8TH3BQL2 631 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 PTGESO14684 152 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 AP2A1O95782 977 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 F2P00734 622 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 PEX19P40855 299 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 GARSP41250 739 aaKnown RBP13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 HARS2P49590 506 aaKnown RBP13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 CCNHP51946 323 aaPredicted RBP13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 CACNA2D1P54289 1103 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 ANKRD20A4Q4UJ75 823 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 IRGCQ6NXR0 463 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 ANKRD23Q86SG2 305 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 TOP6BLQ8N6T0 577 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 ZNF781Q8N8C0 355 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 AGR3Q8TD06 166 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 ZNF184Q99676 751 aaPredicted RBP13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 PRDM16Q9HAZ2 1276 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 CRTAC1Q9NQ79 661 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 CHRAC1Q9NRG0 131 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 BFARQ9NZS9 450 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 ANGPTL2Q9UKU9 493 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 SLC45A1Q9Y2W3 748 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 SF3B1O75533 1304 aaKnown RBP eCLIP13.27□□□□□ -0.292e-14■■■■■ 172.3
SRGAP2-209ENST00000604247 DOCK3Q8IZD9 2030 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 A0A096LPK6 155 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 CCDC78A2IDD5 438 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 MAP3K13O43283 966 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 ZMPSTE24O75844 475 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 USP17L7P0C7H9 530 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 NCAM1P13591 858 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 MX2P20592 715 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 AXLP30530 894 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 EPHB1P54762 984 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 TPI1P60174 286 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 ZBTB17Q13105 803 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 PDPK2PQ6A1A2 396 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 PHTF2Q8N3S3 785 aa13.27□□□□□ -0.29
SRGAP2-209ENST00000604247 EFCAB3Q8N7B9 438 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms