RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 KRT73Q86Y46 540 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 KIAA0895Q8NCT3 520 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 MAGEE2Q8TD90 523 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-208ENST00000599343 XPNPEP3Q9NQH7 507 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 BARX2Q9UMQ3 279 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-208ENST00000599343 GLI2P10070 1586 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 PSMD11O00231 422 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 RGS14O43566 566 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 ZMPSTE24O75844 475 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 HPCAL1P37235 193 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 CAP2P40123 477 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 RFX5P48382 616 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-208ENST00000599343 POLD2P49005 469 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 RNF44Q7L0R7 432 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-208ENST00000599343 FAM20CQ8IXL6 584 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 YME1L1Q96TA2 773 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 NUAK2Q9H093 628 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 ITGA11Q9UKX5 1188 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 STARD13Q9Y3M8 1113 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 PIGNO95427 931 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 ZIK1Q3SY52 487 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-208ENST00000599343 SAMD4BQ5PRF9 694 aaKnown RBP12.04□□□□□ -0.48
SCN8A-208ENST00000599343 AADACL2Q6P093 401 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 BPIFB6Q8NFQ5 453 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 ZNF606Q8WXB4 792 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 ZNF184Q99676 751 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-208ENST00000599343 PACSIN3Q9UKS6 424 aa12.04□□□□□ -0.48
SCN8A-208ENST00000599343 OR56A5P0C7T3 313 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 ZSCAN5DPP0CG00 497 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 LSM3P62310 102 aaKnown RBP12.03□□□□□ -0.48
SCN8A-208ENST00000599343 ELF3P78545 371 aaPredicted RBP12.03□□□□□ -0.48
SCN8A-208ENST00000599343 HLA-DQA1Q5Y7H0 255 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.03□□□□□ -0.48
SCN8A-208ENST00000599343 PROSER1Q86XN7 944 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 C8orf59Q8N0T1 100 aaPredicted RBP12.03□□□□□ -0.48
SCN8A-208ENST00000599343 TEKT5Q96M29 485 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 RHBGQ9H310 441 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 EPB41L4BQ9H329 900 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 SNCAIPQ9Y6H5 919 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 A0A087WXM4 84 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 CCDC130P13994 396 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 TAF13Q15543 124 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 LY6KQ17RY6 165 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 NDUFAF6Q330K2 333 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 EHD4Q9H223 541 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 REEP1Q9H902 201 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 ZFYVE1Q9HBF4 777 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 MOXD2PA6NHM9 499 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 EPN2O95208 641 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 KCNH1O95259 989 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 HMGCRP04035 888 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 CRATP43155 626 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 RENBPP51606 427 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 CDH8P55286 799 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 SLC41A1Q8IVJ1 513 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 LGI2Q8N0V4 545 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 SPACA7Q96KW9 195 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 SETD4Q9NVD3 440 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 ANAPC2Q9UJX6 822 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 ANXA6P08133 673 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 ALADP13716 330 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 SFSWAPQ12872 951 aaKnown RBP12.03□□□□□ -0.48
SCN8A-208ENST00000599343 KRT74Q7RTS7 529 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 DEFB128Q7Z7B8 93 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 EFCAB3Q8N7B9 438 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 GDF3Q9NR23 364 aa12.03□□□□□ -0.48
SCN8A-208ENST00000599343 PPIEQ9UNP9 301 aaKnown RBP12.03□□□□□ -0.48
SCN8A-208ENST00000599343 SF3B1O75533 1304 aaKnown RBP eCLIP12.02□□□□□ -0.48
SCN8A-208ENST00000599343 IQCMA0A1B0GVH7 501 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 VPS4BO75351 444 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 YBX3P16989 372 aaKnown RBP eCLIP12.02□□□□□ -0.48
SCN8A-208ENST00000599343 IDH2P48735 452 aaKnown RBP12.02□□□□□ -0.48
SCN8A-208ENST00000599343 PRKAA2P54646 552 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 IRGCQ6NXR0 463 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 MOXD1Q6UVY6 613 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 PLEKHH3Q7Z736 793 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 PARP8Q8N3A8 854 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 TSEN2Q8NCE0 465 aaKnown RBP12.02□□□□□ -0.48
SCN8A-208ENST00000599343 MCOLN3Q8TDD5 553 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 EPB41L1Q9H4G0 881 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 NRDE2Q9H7Z3 1164 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 CHST7Q9NS84 486 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 RBAK-RBAKDNI3L0D1 243 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.48
SCN8A-208ENST00000599343 SLC25A3Q00325 362 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 FRG1Q14331 258 aaKnown RBP12.02□□□□□ -0.48
SCN8A-208ENST00000599343 TAB1Q15750 504 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 GPSM1Q86YR5 675 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 ANKRD27Q96NW4 1050 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 SLC25A23Q9BV35 468 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 HMG20AQ9NP66 347 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 ENOPH1Q9UHY7 261 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 FAM50BQ9Y247 325 aa12.02□□□□□ -0.48
SCN8A-208ENST00000599343 A0A087X1B8 175 aa12.02□□□□□ -0.49
SCN8A-208ENST00000599343 CD3EAPO15446 510 aaKnown RBP12.02□□□□□ -0.49
SCN8A-208ENST00000599343 NFKB1P19838 968 aa12.02□□□□□ -0.49
SCN8A-208ENST00000599343 PTPN3P26045 913 aa12.02□□□□□ -0.49
SCN8A-208ENST00000599343 RBL1P28749 1068 aa12.02□□□□□ -0.49
SCN8A-208ENST00000599343 RXRGP48443 463 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms