RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SPAG5Q96R06 1193 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 HSD3B7Q9H2F3 369 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 C6orf106Q9H6K1 298 aaPredicted RBP15.53■□□□□ 0.08
LIG1-215ENST00000597901 SGK2Q9HBY8 427 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 TMEM51Q9NW97 253 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 EIF2B4Q9UI10 523 aaKnown RBP15.53■□□□□ 0.08
LIG1-215ENST00000597901 SCML1Q9UN30 329 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 NCKAP1Q9Y2A7 1128 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 DAAM1Q9Y4D1 1078 aa15.53■□□□□ 0.08
LIG1-215ENST00000597901 ITIH6Q6UXX5 1313 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 EDDM13A0A1B0GTR0 161 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 DRGXA6NNA5 263 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 LGALS16A8MUM7 142 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 BCAT2O15382 392 aaPredicted RBP15.52■□□□□ 0.08
LIG1-215ENST00000597901 OPHN1O60890 802 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 CLDN11O75508 207 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 SEMA4FO95754 770 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 FLT3P36888 993 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 GGCXP38435 758 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 STK19P49842 368 aaPredicted RBP15.52■□□□□ 0.08
LIG1-215ENST00000597901 CDH4P55283 916 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 FMO1Q01740 532 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 SFSWAPQ12872 951 aaKnown RBP15.52■□□□□ 0.08
LIG1-215ENST00000597901 TTC31Q49AM3 519 aaPredicted RBP15.52■□□□□ 0.08
LIG1-215ENST00000597901 TRNP1Q6NT89 227 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 USP30Q70CQ3 517 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 ARCQ7LC44 396 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 APTXQ7Z2E3 356 aaKnown RBP15.52■□□□□ 0.08
LIG1-215ENST00000597901 PHLDB2Q86SQ0 1253 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 MMAAQ8IVH4 418 aaKnown RBP15.52■□□□□ 0.08
LIG1-215ENST00000597901 HDDC3Q8N4P3 179 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 DEFB124Q8NES8 71 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 NEK11Q8NG66 645 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 OR52K2Q8NGK3 314 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 GANCQ8TET4 914 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 PTPRN2Q92932 1015 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 PCDHB18PQ96TA0 734 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 PABPC3Q9H361 631 aaKnown RBP15.52■□□□□ 0.08
LIG1-215ENST00000597901 FBXL12Q9NXK8 326 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 TMEM63CQ9P1W3 806 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 TBC1D30Q9Y2I9 924 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 OR51B4Q9Y5P0 310 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 SNX10Q9Y5X0 201 aa15.52■□□□□ 0.08
LIG1-215ENST00000597901 GON4LQ3T8J9 2241 aa15.52■□□□□ 0.07
LIG1-215ENST00000597901 NCOR2Q9Y618 2525 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 UPK3BL1B0FP48 263 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 UPK3BL2E5RIL1 263 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 CNTN5O94779 1100 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 ENDOD1O94919 500 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 MMP8P22894 467 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 PMLP29590 882 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 SLC8A1P32418 973 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 VASPP50552 380 aaPredicted RBP15.51■□□□□ 0.07
LIG1-215ENST00000597901 TYRO3Q06418 890 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 CST6Q15828 149 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 BNIPLQ7Z465 357 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 PIP4P1Q86T03 277 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 ZNF683Q8IZ20 524 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 STK40Q8N2I9 435 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 ZCCHC9Q8N567 271 aaKnown RBP15.51■□□□□ 0.07
LIG1-215ENST00000597901 SLC30A5Q8TAD4 765 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 ERGIC2Q96RQ1 377 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 ZDHHC5Q9C0B5 715 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 NEUROG2Q9H2A3 272 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 SLC32A1Q9H598 525 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 TMPRSS4Q9NRS4 437 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 DNAAF2Q9NVR5 837 aaKnown RBP15.51■□□□□ 0.07
LIG1-215ENST00000597901 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.51■□□□□ 0.07
LIG1-215ENST00000597901 PAXBP1Q9Y5B6 917 aa15.51■□□□□ 0.07
LIG1-215ENST00000597901 NUP205Q92621 2012 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 MID1O15344 667 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 UNGP13051 313 aaPredicted RBP15.5■□□□□ 0.07
LIG1-215ENST00000597901 CD59P13987 128 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 ALFQ53S48 1182 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 ACBD5Q5T8D3 534 aaPredicted RBP15.5■□□□□ 0.07
LIG1-215ENST00000597901 LRRC31Q6UY01 552 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 TRIM72Q6ZMU5 477 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 EMC1Q8N766 993 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 FRS2Q8WU20 508 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 BIRC7Q96CA5 298 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 CFAP57Q96MR6 1250 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 HAPLN3Q96S86 360 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 OMDQ99983 421 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 PLXND1Q9Y4D7 1925 aa15.5■□□□□ 0.07
LIG1-215ENST00000597901 ATP9BO43861 1147 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 SRGAP2O75044 1071 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 GJB3O75712 270 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 FSBPO95073 299 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 ATP1A3P13637 1013 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 VAV1P15498 845 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 CSNK1EP49674 416 aaKnown RBP15.49■□□□□ 0.07
LIG1-215ENST00000597901 GALCP54803 685 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 BNC1Q01954 994 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 GRIK2Q13002 908 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 SLC14A1Q13336 389 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 DLG2Q15700 870 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 ST3GAL2Q16842 350 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 ACCSLQ4AC99 568 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 ARTNQ5T4W7 220 aa15.49■□□□□ 0.07
LIG1-215ENST00000597901 AOPEPQ8N6M6 819 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms