RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 AGPAT1Q99943 283 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 SIK2Q9H0K1 926 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 ADAM22Q9P0K1 906 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 CACNA1EQ15878 2313 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 C2CD4BA6NLJ0 364 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 LRRC53A6NM62 1247 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 CLDN11O75508 207 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 SERPINC1P01008 464 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 IGLV3-19P01714 112 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 CALB1P05937 261 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 SRPRAP08240 638 aaKnown RBP15.56■□□□□ 0.08
TRIM28-205ENST00000595028 PDGFRAP16234 1089 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 CD6P30203 668 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 SDC4P31431 198 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 DPP6P42658 865 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 CTSOP43234 321 aaPredicted RBP15.56■□□□□ 0.08
TRIM28-205ENST00000595028 TPMTP51580 245 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 OXCT1P55809 520 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 TPM4P67936 248 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 SLC12A1Q13621 1099 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 HNRNPA1L2Q32P51 320 aaKnown RBP15.56■□□□□ 0.08
TRIM28-205ENST00000595028 ZSCAN23Q3MJ62 389 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 STPG1Q5TH74 334 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 PEAR1Q5VY43 1037 aaPredicted RBP15.56■□□□□ 0.08
TRIM28-205ENST00000595028 PHLDB2Q86SQ0 1253 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 FAM131BQ86XD5 332 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 APCDD1Q8J025 514 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 C3orf20Q8ND61 904 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 JOSD2Q8TAC2 188 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 PIGKQ92643 395 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 SYT11Q9BT88 431 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 TTYH3Q9C0H2 523 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 PRSS16Q9NQE7 514 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 ITM2CQ9NQX7 267 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 ERVW-1Q9UQF0 538 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 ITIH6Q6UXX5 1313 aa15.56■□□□□ 0.08
TRIM28-205ENST00000595028 ATXN2Q99700 1313 aaKnown RBP15.56■□□□□ 0.08
TRIM28-205ENST00000595028 SMG1Q96Q15 3661 aaKnown RBP15.56■□□□□ 0.08
TRIM28-205ENST00000595028 ENDOD1O94919 500 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 GJB6O95452 261 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 ITPKAP23677 461 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 MZF1P28698 734 aaPredicted RBP15.55■□□□□ 0.08
TRIM28-205ENST00000595028 HOXD12P35452 270 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 PTPN9P43378 593 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 PLK1P53350 603 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 CDH4P55283 916 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 ATP11AP98196 1134 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 ECT2LQ008S8 904 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 ZNF33AQ06730 810 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 C1QBPQ07021 282 aaKnown RBP15.55■□□□□ 0.08
TRIM28-205ENST00000595028 ARID5BQ14865 1188 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 ACBD5Q5T8D3 534 aaPredicted RBP15.55■□□□□ 0.08
TRIM28-205ENST00000595028 RNF219Q5W0B1 726 aaPredicted RBP15.55■□□□□ 0.08
TRIM28-205ENST00000595028 IRF2BP2Q7Z5L9 587 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 SYT12Q8IV01 421 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 SLC41A1Q8IVJ1 513 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 ZNF683Q8IZ20 524 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 DEFB119Q8N690 84 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 RXFP2Q8WXD0 754 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 TOE1Q96GM8 510 aaKnown RBP15.55■□□□□ 0.08
TRIM28-205ENST00000595028 HSPA12BQ96MM6 686 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 TMPRSS4Q9NRS4 437 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 WSB2Q9NYS7 404 aaPredicted RBP15.55■□□□□ 0.08
TRIM28-205ENST00000595028 SUN2Q9UH99 717 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 SNX10Q9Y5X0 201 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 PCDH15Q96QU1 1955 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 LOC400499M0QZD8 3231 aa15.55■□□□□ 0.08
TRIM28-205ENST00000595028 LAMA5O15230 3695 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 FLNBO75369 2602 aaKnown RBP15.54■□□□□ 0.08
TRIM28-205ENST00000595028 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.54■□□□□ 0.08
TRIM28-205ENST00000595028 LNP1A1A4G5 178 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 PATE3B3GLJ2 98 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 SIN3BO75182 1162 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 NDUFS2O75306 463 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 CNTN5O94779 1100 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 ACADMP11310 421 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 KRT3P12035 628 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 OXTRP30559 389 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 RPS14P62263 151 aaKnown RBP15.54■□□□□ 0.08
TRIM28-205ENST00000595028 FANCCQ00597 558 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 ZBTB16Q05516 673 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 SULT2A1Q06520 285 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 ZNF177Q13360 481 aaPredicted RBP15.54■□□□□ 0.08
TRIM28-205ENST00000595028 NR1I3Q14994 352 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 ASIC2Q16515 512 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 CDO1Q16878 200 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 C15orf59Q2T9L4 293 aaPredicted RBP15.54■□□□□ 0.08
TRIM28-205ENST00000595028 SKOR2Q2VWA4 1001 aaPredicted RBP15.54■□□□□ 0.08
TRIM28-205ENST00000595028 CCDC14Q49A88 953 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 ALFQ53S48 1182 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 E4F1Q66K89 784 aaPredicted RBP15.54■□□□□ 0.08
TRIM28-205ENST00000595028 ZNF776Q68DI1 518 aaPredicted RBP15.54■□□□□ 0.08
TRIM28-205ENST00000595028 PSAPL1Q6NUJ1 521 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 LRSAM1Q6UWE0 723 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 OR52K2Q8NGK3 314 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 C1orf74Q96LT6 269 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 HAPLN3Q96S86 360 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 EDEM2Q9BV94 578 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 SELENOOQ9BVL4 669 aa15.54■□□□□ 0.08
TRIM28-205ENST00000595028 MTG2Q9H4K7 406 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms