RNA–Protein interactions for RNA: ENST00000594780.1

CLPP-202, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

TSL 2

Gene CLPP, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-202ENST00000594780 NOS2P35228 1153 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 CHKAP35790 457 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 EIF2DP41214 584 aaKnown RBP13.4□□□□□ -0.26
CLPP-202ENST00000594780 MATKP42679 507 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 RNASE9P60153 205 aaKnown RBP13.4□□□□□ -0.26
CLPP-202ENST00000594780 LRRC32Q14392 662 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 CSRP2Q16527 193 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 UNQ6494/PRO21346Q6UXR6 183 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 MAMSTRQ6ZN01 415 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 PRR23BQ6ZRT6 265 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 Q6ZS52 159 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 CYP4V2Q6ZWL3 525 aaPredicted RBP13.4□□□□□ -0.26
CLPP-202ENST00000594780 STRADAQ7RTN6 431 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 UNC45BQ8IWX7 931 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 PHTF2Q8N3S3 785 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 SYNPOQ8N3V7 929 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 CPXM2Q8N436 756 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 LRRN4CLQ8ND94 238 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 PNKPQ96T60 521 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 PSMB7Q99436 277 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 NPY6RQ99463 290 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 BBS2Q9BXC9 721 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 ADAM33Q9BZ11 813 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 CALCOCO1Q9P1Z2 691 aa13.4□□□□□ -0.26
CLPP-202ENST00000594780 ATG2BQ96BY7 2078 aa13.4□□□□□ -0.27
CLPP-202ENST00000594780 GOLGA6L7A0A1B0GV03 622 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 CTAGE15A4D2H0 777 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 ANTXRLA6NF34 631 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 NEDD8-MDP1E9PL57 170 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 K7EQS6 105 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 PGRMC1O00264 195 aaKnown RBP13.39□□□□□ -0.27
CLPP-202ENST00000594780 TRIM24O15164 1050 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 CACNG3O60359 315 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 TULP3O75386 442 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 RNF8O76064 485 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 PENKP01210 267 aaPredicted RBP13.39□□□□□ -0.27
CLPP-202ENST00000594780 CISD3P0C7P0 127 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 CTAGE8P0CG41 777 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 TYRP14679 529 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 SDC4P31431 198 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 SLC6A4P31645 630 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 PTPN7P35236 360 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 PAFAH1B1P43034 410 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 SRSF5Q13243 272 aaKnown RBP13.39□□□□□ -0.27
CLPP-202ENST00000594780 TAZQ16635 292 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 ZC3H12AQ5D1E8 599 aaKnown RBP13.39□□□□□ -0.27
CLPP-202ENST00000594780 ADGRF1Q5T601 910 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 OTUD1Q5VV17 481 aaPredicted RBP13.39□□□□□ -0.27
CLPP-202ENST00000594780 FYB2Q5VWT5 728 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 NUGGCQ68CJ6 796 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 NADSYN1Q6IA69 706 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 CTAGE6Q86UF2 777 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 SFTPA1Q8IWL2 248 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 CTAGE4Q8IX94 777 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 EXD1Q8NHP7 514 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 EXOC4Q96A65 974 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 PGAP3Q96FM1 320 aaPredicted RBP13.39□□□□□ -0.27
CLPP-202ENST00000594780 FAM126AQ9BYI3 521 aaPredicted RBP13.39□□□□□ -0.27
CLPP-202ENST00000594780 RXFP3Q9NSD7 469 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 DDX56Q9NY93 547 aaKnown RBP13.39□□□□□ -0.27
CLPP-202ENST00000594780 RRN3Q9NYV6 651 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 PLK2Q9NYY3 685 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLPP-202ENST00000594780 FBXO10Q9UK96 956 aa13.39□□□□□ -0.27
CLPP-202ENST00000594780 FREM2Q5SZK8 3169 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 KCNU1A8MYU2 1149 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 CEP104O60308 925 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 ACSL4O60488 711 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 TSPAN3O60637 253 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 KAT7O95251 611 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 KRT7P08729 469 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 PYGMP11217 842 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 CHRM1P11229 460 aaPredicted RBP13.38□□□□□ -0.27
CLPP-202ENST00000594780 TCF4P15884 667 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 TFE3P19532 575 aaPredicted RBP13.38□□□□□ -0.27
CLPP-202ENST00000594780 IL1R2P27930 398 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 MIPP30301 263 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 GBP1P32455 592 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 HDAC4P56524 1084 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 COPS2P61201 443 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 HADHQ16836 314 aaKnown RBP13.38□□□□□ -0.27
CLPP-202ENST00000594780 SLC25A52Q3SY17 297 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 FAM133BQ5BKY9 247 aaKnown RBP13.38□□□□□ -0.27
CLPP-202ENST00000594780 CCDC181Q5TID7 509 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 DAB2IPQ5VWQ8 1189 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 PKN3Q6P5Z2 889 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 VSIG1Q86XK7 387 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 KDF1Q8NAX2 398 aaPredicted RBP13.38□□□□□ -0.27
CLPP-202ENST00000594780 SPATA4Q8NEY3 305 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 TEKT4Q8WW24 435 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 BHMTQ93088 406 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 MS4A14Q96JA4 679 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 CAPZA3Q96KX2 299 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 CFAP57Q96MR6 1250 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 TBCBQ99426 244 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 NAP1L3Q99457 506 aaPredicted RBP13.38□□□□□ -0.27
CLPP-202ENST00000594780 IER2Q9BTL4 223 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 FAM204AQ9H8W3 233 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 ARHGEF4Q9NR80 690 aa13.38□□□□□ -0.27
CLPP-202ENST00000594780 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms