RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 SLC12A1Q13621 1099 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 MORC3Q14149 939 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 TAF5Q15542 800 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 INAVAQ3KP66 663 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 KLHL10Q6JEL2 608 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 TMPRSS12Q86WS5 348 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 CHSY1Q86X52 802 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 GATAD2AQ86YP4 633 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 CCDC117Q8IWD4 279 aaPredicted RBP16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 PDCD7Q8N8D1 485 aaKnown RBP16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 HNRNPLLQ8WVV9 542 aaKnown RBP16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 ALG14Q96F25 216 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 OMDQ99983 421 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 TRIM62Q9BVG3 475 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 THAP9Q9H5L6 903 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 POPDC2Q9HBU9 364 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 FTSJ1Q9UET6 329 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 TPX2Q9ULW0 747 aaKnown RBP16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 ADAMTS20P59510 1910 aa16.42■□□□□ 0.22
GTF2F1-203ENST00000594213 A0A087WV48 116 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 E9PAM4 449 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 GNA14O95837 355 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 ADH1BP00325 375 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 AFPP02771 609 aaKnown RBP16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 VAV1P15498 845 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 RXRGP48443 463 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 PSMD8P48556 350 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 ELAVL3Q14576 367 aaKnown RBP16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 CXorf57Q6NSI4 855 aaKnown RBP16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 SND1Q7KZF4 910 aaKnown RBP eCLIP16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 WDTC1Q8N5D0 677 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 TSC1Q92574 1164 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 SKA1Q96BD8 255 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 MED15Q96RN5 788 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 UBE2TQ9NPD8 197 aaPredicted RBP16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 ACP6Q9NPH0 428 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 ARHGAP20Q9P2F6 1191 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 TJP2Q9UDY2 1190 aa16.41■□□□□ 0.22
GTF2F1-203ENST00000594213 BICDL2A1A5D9 508 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 TLR4O00206 839 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 CBX4O00257 560 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 ENC1O14682 589 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 CAPN9O14815 690 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 LETM1O95202 739 aaPredicted RBP16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 KRT5P13647 590 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 PDGFRAP16234 1089 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 METAP1P53582 386 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 NXPH1P58417 271 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 PPP2CBP62714 309 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 PPP2CAP67775 309 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 SULT2A1Q06520 285 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 KANSL1Q7Z3B3 1105 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 CIR1Q86X95 450 aaPredicted RBP16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 CCAR2Q8N163 923 aaKnown RBP16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 ATP6V0D2Q8N8Y2 350 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 OR14C36Q8NHC7 312 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 SLC2A13Q96QE2 648 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 ERVMER34-1Q9H9K5 563 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 GDF3Q9NR23 364 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 AASDHPPTQ9NRN7 309 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 OR51B4Q9Y5P0 310 aa16.4■□□□□ 0.22
GTF2F1-203ENST00000594213 BECN2A8MW95 431 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 F5H5T6 163 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 YKT6O15498 198 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 MED7O43513 233 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 ATP9BO43861 1147 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 LDOC1O95751 146 aaPredicted RBP16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 ITGAVP06756 1048 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 GLI1P08151 1106 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 C1SP09871 688 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 EPHA8P29322 1005 aaPredicted RBP16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 STX17P56962 302 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 PDCLQ13371 301 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 CCDC157Q569K6 752 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 SFMBT2Q5VUG0 894 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 RNF219Q5W0B1 726 aaPredicted RBP16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 FBXL22Q6P050 247 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 SPATS2Q86XZ4 545 aaKnown RBP16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 OR52K2Q8NGK3 314 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 SERAC1Q96JX3 654 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 CNDP2Q96KP4 475 aaKnown RBP16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 BBC3Q96PG8 261 aaPredicted RBP16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 SPAG5Q96R06 1193 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 SRRTQ9BXP5 876 aaKnown RBP16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 KDM4CQ9H3R0 1056 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 ASNSD1Q9NWL6 643 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 SARDHQ9UL12 918 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 PPM1HQ9ULR3 514 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 CTNND2Q9UQB3 1225 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 CEP83Q9Y592 693 aa16.39■□□□□ 0.21
GTF2F1-203ENST00000594213 A0A1B0GVM2 712 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 TCAF2A6NFQ2 919 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 IL1BP01584 269 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 SLC2A3P11169 496 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 CDK4P11802 303 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 GNA15P30679 374 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 NNMTP40261 264 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms