RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 BNIP3Q12983 259 aa18.05■□□□□ 0.48
RETREG3-212ENST00000593251 KLHL10Q6JEL2 608 aa18.05■□□□□ 0.48
RETREG3-212ENST00000593251 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.05■□□□□ 0.48
RETREG3-212ENST00000593251 TMPRSS12Q86WS5 348 aa18.05■□□□□ 0.48
RETREG3-212ENST00000593251 CEP63Q96MT8 703 aa18.05■□□□□ 0.48
RETREG3-212ENST00000593251 KREMEN1Q96MU8 473 aa18.05■□□□□ 0.48
RETREG3-212ENST00000593251 GDF3Q9NR23 364 aa18.05■□□□□ 0.48
RETREG3-212ENST00000593251 TJP2Q9UDY2 1190 aa18.05■□□□□ 0.48
RETREG3-212ENST00000593251 CYTH4Q9UIA0 394 aa18.05■□□□□ 0.48
RETREG3-212ENST00000593251 A0A087WV48 116 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 TBC1D3DA0A087WVF3 549 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 TBC1D3IA0A087WXS9 549 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 TBC1D3EA0A087X179 549 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 TBC1D3KA0A087X1G2 549 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 TBC1D3FA6NER0 549 aaPredicted RBP18.04■□□□□ 0.48
RETREG3-212ENST00000593251 TBC1D3LB9A6J9 549 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 ADH1BP00325 375 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 TBC1D3HP0C7X1 549 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 KRT5P13647 590 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 JUPP14923 745 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 PDGFRAP16234 1089 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 C5AR1P21730 350 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 MZF1P28698 734 aaPredicted RBP18.04■□□□□ 0.48
RETREG3-212ENST00000593251 EPHA8P29322 1005 aaPredicted RBP18.04■□□□□ 0.48
RETREG3-212ENST00000593251 DRD3P35462 400 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 RPL34P49207 117 aaKnown RBP18.04■□□□□ 0.48
RETREG3-212ENST00000593251 NUCB2P80303 420 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 GCNT1Q02742 428 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 CETN1Q12798 172 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 STIM1Q13586 685 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 TBC1D3GQ6DHY5 549 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 TBC1D3CQ6IPX1 549 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 TBC1D3Q8IZP1 549 aaPredicted RBP18.04■□□□□ 0.48
RETREG3-212ENST00000593251 EHBP1Q8NDI1 1231 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 PIP4K2CQ8TBX8 421 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 DHTKD1Q96HY7 919 aaPredicted RBP18.04■□□□□ 0.48
RETREG3-212ENST00000593251 PCDHGA1Q9Y5H4 931 aa18.04■□□□□ 0.48
RETREG3-212ENST00000593251 GOLGA6L4A6NEF3 574 aa18.03■□□□□ 0.48
RETREG3-212ENST00000593251 E5RJQ4 531 aa18.03■□□□□ 0.48
RETREG3-212ENST00000593251 F5H5T6 163 aa18.03■□□□□ 0.48
RETREG3-212ENST00000593251 TLR4O00206 839 aa18.03■□□□□ 0.48
RETREG3-212ENST00000593251 SART1O43290 800 aaKnown RBP18.03■□□□□ 0.48
RETREG3-212ENST00000593251 RTN2O75298 545 aa18.03■□□□□ 0.48
RETREG3-212ENST00000593251 TRUB2O95900 331 aaKnown RBP18.03■□□□□ 0.48
RETREG3-212ENST00000593251 MAT2AP31153 395 aaKnown RBP18.03■□□□□ 0.48
RETREG3-212ENST00000593251 ACADSBP45954 432 aa18.03■□□□□ 0.48
RETREG3-212ENST00000593251 ACADVLP49748 655 aa18.03■□□□□ 0.48
RETREG3-212ENST00000593251 NXPH1P58417 271 aa18.03■□□□□ 0.48
RETREG3-212ENST00000593251 TAF5Q15542 800 aa18.03■□□□□ 0.48
RETREG3-212ENST00000593251 CCAR2Q8N163 923 aaKnown RBP18.03■□□□□ 0.48
RETREG3-212ENST00000593251 BTN2A3PQ96KV6 586 aa18.03■□□□□ 0.48
RETREG3-212ENST00000593251 ACP6Q9NPH0 428 aa18.03■□□□□ 0.48
RETREG3-212ENST00000593251 MAN1B1Q9UKM7 699 aa18.03■□□□□ 0.48
RETREG3-212ENST00000593251 ASXL3Q9C0F0 2248 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 SYNJ2BP-COX16A0A087WUM0 186 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 P4HA2O15460 535 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 LETM1O95202 739 aaPredicted RBP18.02■□□□□ 0.48
RETREG3-212ENST00000593251 IGLV3-25P01717 112 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 ITPKBP27987 946 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 HNF1BP35680 557 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 NNMTP40261 264 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 ABCG1P45844 678 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 ARRB1P49407 418 aaPredicted RBP18.02■□□□□ 0.48
RETREG3-212ENST00000593251 SEMG2Q02383 582 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 KCNH2Q12809 1159 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 TARDBPQ13148 414 aaKnown RBP eCLIP18.02■□□□□ 0.48
RETREG3-212ENST00000593251 ELAVL3Q14576 367 aaKnown RBP18.02■□□□□ 0.48
RETREG3-212ENST00000593251 POM121L1PQ3SYA9 428 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 SLC45A4Q5BKX6 768 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 HES3Q5TGS1 186 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 TTI2Q6NXR4 508 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 SPATS2Q86XZ4 545 aaKnown RBP18.02■□□□□ 0.48
RETREG3-212ENST00000593251 ATP6V0D2Q8N8Y2 350 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 NXPE2Q96DL1 559 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 SLC4A5Q9BY07 1137 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 INTS2Q9H0H0 1204 aaKnown RBP18.02■□□□□ 0.48
RETREG3-212ENST00000593251 POPDC2Q9HBU9 364 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 COX16Q9P0S2 106 aa18.02■□□□□ 0.48
RETREG3-212ENST00000593251 EIF4E1BA6NMX2 242 aaKnown RBP18.01■□□□□ 0.47
RETREG3-212ENST00000593251 KCNU1A8MYU2 1149 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 E9PAM4 449 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 YKT6O15498 198 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 LATO43561 262 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 TLX3O43711 291 aaPredicted RBP18.01■□□□□ 0.47
RETREG3-212ENST00000593251 YWHAZP63104 245 aaKnown RBP18.01■□□□□ 0.47
RETREG3-212ENST00000593251 C6orf118Q5T5N4 469 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 NAPEPLDQ6IQ20 393 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 BEND5Q7L4P6 421 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 FRS2Q8WU20 508 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 NELFBQ8WX92 580 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 ZNF606Q8WXB4 792 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 PRMT1Q99873 361 aaKnown RBP18.01■□□□□ 0.47
RETREG3-212ENST00000593251 GTPBP4Q9BZE4 634 aaKnown RBP18.01■□□□□ 0.47
RETREG3-212ENST00000593251 FAM204AQ9H8W3 233 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 ARHGAP20Q9P2F6 1191 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 SARDHQ9UL12 918 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 CNTN6Q9UQ52 1028 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 CTNND2Q9UQB3 1225 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 AK5Q9Y6K8 562 aa18.01■□□□□ 0.47
RETREG3-212ENST00000593251 PPP1R3GB7ZBB8 358 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms