RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 SIK2Q9H0K1 926 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 VANGL2Q9ULK5 521 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 BTBD3Q9Y2F9 522 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 SPEGQ15772 3267 aa18.5■□□□□ 0.55
CIRBP-243ENST00000593128 SRRM3A6NNA2 597 aaPredicted RBP18.49■□□□□ 0.55
CIRBP-243ENST00000593128 H0Y8X5 98 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 BNIP3LO60238 219 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 CBFA2T3O75081 653 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 CCT8P50990 548 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 SNX16P57768 344 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 RAPGEF1Q13905 1077 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 POM121L1PQ3SYA9 428 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 PRAMEF14Q5SWL7 426 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 FBXL22Q6P050 247 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 IRF2BP1Q8IU81 584 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 KDM1BQ8NB78 822 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 ADAMTS14Q8WXS8 1223 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 SLC2A13Q96QE2 648 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 SLC25A13Q9UJS0 675 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 PCDHGC3Q9UN70 934 aa18.49■□□□□ 0.55
CIRBP-243ENST00000593128 A0A1B0GVM2 712 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 GTPBP10A4D1E9 387 aaKnown RBP18.48■□□□□ 0.55
CIRBP-243ENST00000593128 TCAF2A6NFQ2 919 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 M0QYT0 321 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 FOXN3O00409 490 aaPredicted RBP18.48■□□□□ 0.55
CIRBP-243ENST00000593128 PLK4O00444 970 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 ADH1BP00325 375 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 GLI1P08151 1106 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 ATXN1LP0C7T5 689 aaKnown RBP18.48■□□□□ 0.55
CIRBP-243ENST00000593128 IRAK1P51617 712 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 AUHQ13825 339 aaKnown RBP18.48■□□□□ 0.55
CIRBP-243ENST00000593128 MAN2A1Q16706 1144 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 TTC39BQ5VTQ0 682 aaPredicted RBP18.48■□□□□ 0.55
CIRBP-243ENST00000593128 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.48■□□□□ 0.55
CIRBP-243ENST00000593128 SND1Q7KZF4 910 aaKnown RBP eCLIP18.48■□□□□ 0.55
CIRBP-243ENST00000593128 FAM114A1Q8IWE2 563 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 AADATQ8N5Z0 425 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 OR2T34Q8NGX1 318 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 PTPRN2Q92932 1015 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 IGSF8Q969P0 613 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 FAM129BQ96TA1 746 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 CDC6Q99741 560 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 PRMT1Q99873 361 aaKnown RBP18.48■□□□□ 0.55
CIRBP-243ENST00000593128 SIX2Q9NPC8 291 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 OSGEPQ9NPF4 335 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 PCDHGB2Q9Y5G2 931 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 ITIH6Q6UXX5 1313 aa18.48■□□□□ 0.55
CIRBP-243ENST00000593128 TBC1D3DA0A087WVF3 549 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 TBC1D3IA0A087WXS9 549 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 TBC1D3EA0A087X179 549 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 TBC1D3KA0A087X1G2 549 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-243ENST00000593128 A0A1W2PPC4 97 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 TBC1D3FA6NER0 549 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-243ENST00000593128 TBC1D3LB9A6J9 549 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 DAB1O75553 588 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 TBC1D3HP0C7X1 549 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 ZNF18P17022 549 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 C5AR1P21730 350 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 SLC6A3Q01959 620 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 SULT2A1Q06520 285 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 ZNF177Q13360 481 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-243ENST00000593128 SLC12A1Q13621 1099 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 ARID5BQ14865 1188 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 PTPN20Q4JDL3 420 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 TBC1D3GQ6DHY5 549 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 TBC1D3CQ6IPX1 549 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 CXorf57Q6NSI4 855 aaKnown RBP18.47■□□□□ 0.55
CIRBP-243ENST00000593128 OLFML1Q6UWY5 402 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 TBC1D3Q8IZP1 549 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-243ENST00000593128 SKA1Q96BD8 255 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 ASNSD1Q9NWL6 643 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 VPS28Q9UK41 221 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 FZD4Q9ULV1 537 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 HS3ST4Q9Y661 456 aa18.47■□□□□ 0.55
CIRBP-243ENST00000593128 PAGE1O75459 146 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 GOT1P17174 413 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 CLCN1P35523 988 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 CTSKP43235 329 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 SULT1E1P49888 294 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 METAP1P53582 386 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 ADPRHP54922 357 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 OXCT1P55809 520 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 RACK1P63244 317 aaKnown RBP18.46■□□□□ 0.55
CIRBP-243ENST00000593128 SCAPQ12770 1279 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 ELAVL3Q14576 367 aaKnown RBP18.46■□□□□ 0.55
CIRBP-243ENST00000593128 DPCR1Q3MIW9 517 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 VWA3BQ502W6 1294 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 TAF3Q5VWG9 929 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 C14orf80Q86SX3 495 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 GLRX5Q86SX6 157 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 GATAD2AQ86YP4 633 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 SERAC1Q96JX3 654 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 ORAI3Q9BRQ5 295 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 TUBGCP2Q9BSJ2 902 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 MUC3BQ9H195 1237 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 NDST4Q9H3R1 872 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 CLSTN2Q9H4D0 955 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 EBF2Q9HAK2 575 aa18.46■□□□□ 0.55
CIRBP-243ENST00000593128 SNX10Q9Y5X0 201 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms