RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 TSGA13Q96PP4 275 aa11.68□□□□□ -0.54
TUBD1-211ENST00000591548 CEP41Q9BYV8 373 aa11.68□□□□□ -0.54
TUBD1-211ENST00000591548 MTRF1LQ9UGC7 380 aaKnown RBP11.68□□□□□ -0.54
TUBD1-211ENST00000591548 ZFP37Q9Y6Q3 630 aaPredicted RBP11.68□□□□□ -0.54
TUBD1-211ENST00000591548 DOCK4Q8N1I0 1966 aa11.68□□□□□ -0.54
TUBD1-211ENST00000591548 NOTCH4Q99466 2003 aa11.68□□□□□ -0.54
TUBD1-211ENST00000591548 A0A0A0MRY4 1105 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 TCRBV7S3A2A0A539 114 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 MAFKO60675 156 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 PPFIA2O75334 1257 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 METTL18O95568 372 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 LATS1O95835 1130 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 POU2F2P09086 479 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 PFKLP17858 780 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 ACTN2P35609 894 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 SGSHP51688 502 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 NDST2P52849 883 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 RPS24P62847 133 aaKnown RBP11.67□□□□□ -0.54
TUBD1-211ENST00000591548 GAD2Q05329 585 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 ZNF33AQ06730 810 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 MORF4L2Q15014 288 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 TEAD2Q15562 447 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 GPR158Q5T848 1215 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 PCGF5Q86SE9 256 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 PPIL6Q8IXY8 311 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 ZNF567Q8N184 647 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 C12orf76Q8N812 135 aaPredicted RBP11.67□□□□□ -0.54
TUBD1-211ENST00000591548 LEMD2Q8NC56 503 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 PRCCQ92733 491 aaPredicted RBP11.67□□□□□ -0.54
TUBD1-211ENST00000591548 TIFAQ96CG3 184 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 SPATA13Q96N96 652 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 SMG9Q9H0W8 520 aaKnown RBP11.67□□□□□ -0.54
TUBD1-211ENST00000591548 RAB6BQ9NRW1 208 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 SEPT10Q9P0V9 454 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 HPCAL4Q9UM19 191 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 SHOC2Q9UQ13 582 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 ATP8A1Q9Y2Q0 1164 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 NUP205Q92621 2012 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 GFRA2O00451 464 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 TSPAN3O60637 253 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 TMEM63AO94886 807 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 PAPLNO95428 1278 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 CCNCP24863 283 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 PTPN3P26045 913 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 OR1E1P30953 314 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 PAPOLAP51003 745 aaKnown RBP11.67□□□□□ -0.54
TUBD1-211ENST00000591548 BASP1P80723 227 aaKnown RBP11.67□□□□□ -0.54
TUBD1-211ENST00000591548 ZBTB17Q13105 803 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 KCNJ11Q14654 390 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 UAP1Q16222 522 aaPredicted RBP11.67□□□□□ -0.54
TUBD1-211ENST00000591548 SYCP2LQ5T4T6 812 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 FAXCQ5TGI0 409 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 C4orf22Q6V702 233 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 HTR3DQ70Z44 454 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 HOOK3Q86VS8 718 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 CCDC13Q8IYE1 715 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 CMTM8Q8IZV2 173 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 ZCCHC9Q8N567 271 aaKnown RBP11.67□□□□□ -0.54
TUBD1-211ENST00000591548 ATPAF2Q8N5M1 289 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 MRPL38Q96DV4 380 aaKnown RBP11.67□□□□□ -0.54
TUBD1-211ENST00000591548 TASP1Q9H6P5 420 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 ETNK1Q9HBU6 452 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 DONSONQ9NYP3 566 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 CFAP97Q9P2B7 532 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 CCL26Q9Y258 94 aa11.67□□□□□ -0.54
TUBD1-211ENST00000591548 REV3LO60673 3130 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 NYNRINQ9P2P1 1898 aaKnown RBP11.66□□□□□ -0.54
TUBD1-211ENST00000591548 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.66□□□□□ -0.54
TUBD1-211ENST00000591548 RASA4BC9J798 803 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 GOLGA8MH3BSY2 632 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 LEFTY2O00292 366 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 NDC80O14777 642 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 MTSS1O43312 755 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 RASA4O43374 803 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 OPHN1O60890 802 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 ZNF189O75820 626 aaPredicted RBP11.66□□□□□ -0.54
TUBD1-211ENST00000591548 STK10O94804 968 aaKnown RBP11.66□□□□□ -0.54
TUBD1-211ENST00000591548 DDX6P26196 483 aaKnown RBP eCLIP11.66□□□□□ -0.54
TUBD1-211ENST00000591548 HSD17B3P37058 310 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 MAGEA6P43360 314 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 MAPKAPK2P49137 400 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 CDH4P55283 916 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 RABGAP1LQ5R372 815 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 UBAP2Q5T6F2 1119 aaKnown RBP11.66□□□□□ -0.54
TUBD1-211ENST00000591548 ELMSAN1Q6PJG2 1045 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 TMC5Q6UXY8 1006 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 ARHGEF18Q6ZSZ5 1173 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 CCDC25Q86WR0 208 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 LRRC49Q8IUZ0 686 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 FAM217AQ8IXS0 508 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 TTC16Q8NEE8 873 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 OR52K2Q8NGK3 314 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 ZBTB9Q96C00 473 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 HMCESQ96FZ2 354 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 ZNF419Q96HQ0 510 aaPredicted RBP11.66□□□□□ -0.54
TUBD1-211ENST00000591548 ZSWIM3Q96MP5 696 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 FERMT1Q9BQL6 677 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 EPB41L4BQ9H329 900 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 PRO3102Q9H379 93 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 SEMA4AQ9H3S1 761 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms