RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 CLEC4CQ8WTT0 213 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 KLK6Q92876 244 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 PRR11Q96HE9 360 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 APOLD1Q96LR9 279 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 IMPG2Q9BZV3 1241 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 FZD3Q9NPG1 666 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 OLA1Q9NTK5 396 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 IL17BQ9UHF5 180 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 XPO7Q9UIA9 1087 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 TSPAN16Q9UKR8 245 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 ITIH6Q6UXX5 1313 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 PVALEFA0A1B0GWK0 134 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 XPO1O14980 1071 aaKnown RBP13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 EFSO43281 561 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 NEBLO76041 1014 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 ASLP04424 464 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 CKMT1AP12532 417 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 LCP1P13796 627 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 PRLRP16471 622 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 TGM2P21980 687 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 CNTN1Q12860 1018 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 SFSWAPQ12872 951 aaKnown RBP13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 SRSF6Q13247 344 aaKnown RBP13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 ZNF542PQ5EBM4 170 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 PRPF39Q86UA1 669 aaKnown RBP13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 HSCBQ8IWL3 235 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 LSMEM2Q8N112 164 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 HJURPQ8NCD3 748 aaPredicted RBP13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 TMEM174Q8WUU8 243 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 SNX21Q969T3 373 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 FAM131CQ96AQ9 280 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 ATXN7L3BQ96GX2 97 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 NOX5Q96PH1 765 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 DEPDC7Q96QD5 511 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 DPH1Q9BZG8 443 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 LRRC4Q9HBW1 653 aa13.21□□□□□ -0.29
PRKCSH-210ENST00000589990 K7ELQ4 463 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 PLRG1O43660 514 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 ADH1BP00325 375 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 THEGLP0DJG4 465 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 PDIA4P13667 645 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 RGS7P49802 495 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 DAOAP59103 153 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 TAS2R38P59533 333 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 ECT2LQ008S8 904 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 CDH18Q13634 790 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 STAT4Q14765 748 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 ISXQ2M1V0 245 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 LINC00303Q3SY05 128 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 KMT5BQ4FZB7 885 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 DCAF6Q58WW2 860 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 AGBL4Q5VU57 503 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 MSANTD2Q6P1R3 559 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 CRTC1Q6UUV9 634 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 IQCHQ86VS3 1027 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 SLC22A18ASQ8N1D0 253 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 KDM1BQ8NB78 822 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 TMEM145Q8NBT3 493 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 KLHDC7BQ96G42 594 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 FCRL2Q96LA5 508 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 IPO9Q96P70 1041 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 THSD1Q9NS62 852 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 ABCC13Q9NSE7 274 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 CEP83Q9Y592 693 aa13.2□□□□□ -0.3
PRKCSH-210ENST00000589990 RNF103O00237 685 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 PDXKO00764 312 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 TERTO14746 1132 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 SLC31A1O15431 190 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 PPP6R2O75170 966 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 PIAS2O75928 621 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 LUC7L3O95232 432 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 SRPRAP08240 638 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 PDCP20941 246 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 SLC11A2P49281 568 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 TBX4P57082 545 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 CLDN2P57739 230 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 KCNMA1Q12791 1236 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 CLN3Q13286 438 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 DRAP1Q14919 205 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 MS4A13Q5J8X5 152 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 C6orf132Q5T0Z8 1188 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 FOXR1Q6PIV2 292 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 TRIM69Q86WT6 500 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 CIR1Q86X95 450 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 OR13H1Q8NG92 308 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 FRS2Q8WU20 508 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 EEF2KMTQ96G04 330 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 SLC46A1Q96NT5 459 aa13.19□□□□□ -0.3
PRKCSH-210ENST00000589990 RP1P56715 2156 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 AHCTF1Q8WYP5 2266 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 USP9XQ93008 2570 aaPredicted RBP13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 PRAMEF26H0Y7S4 382 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 IRAK2O43187 625 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 CUTAO60888 179 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 MOCS2O96007 188 aaPredicted RBP13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 CALCAP01258 141 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 FYNP06241 537 aa13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 BST2Q10589 180 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-210ENST00000589990 OVGP1Q12889 678 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms