RNA–Protein interactions for RNA: ENST00000587597.5

RTN2-204, Transcript of reticulon 2, humanhuman

TSL 5

Gene RTN2, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-204ENST00000587597 SPATA17Q96L03 361 aa25.27■■□□□ 1.64
RTN2-204ENST00000587597 CEP41Q9BYV8 373 aa25.27■■□□□ 1.64
RTN2-204ENST00000587597 NEU3Q9UQ49 428 aa25.27■■□□□ 1.64
RTN2-204ENST00000587597 PRPF4O43172 522 aaKnown RBP eCLIP25.26■■□□□ 1.63
RTN2-204ENST00000587597 VIMP08670 466 aaKnown RBP25.26■■□□□ 1.63
RTN2-204ENST00000587597 EFEMP1Q12805 493 aa25.26■■□□□ 1.63
RTN2-204ENST00000587597 CCT6BQ92526 530 aa25.26■■□□□ 1.63
RTN2-204ENST00000587597 SMG5Q9UPR3 1016 aaKnown RBP25.26■■□□□ 1.63
RTN2-204ENST00000587597 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.26■■□□□ 1.63
RTN2-204ENST00000587597 NCAM2O15394 837 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 SPAG7O75391 227 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 EPHB2P29323 1055 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 SARNPP82979 210 aaKnown RBP25.25■■□□□ 1.63
RTN2-204ENST00000587597 DSG1Q02413 1049 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 WASHC5Q12768 1159 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 KBTBD12Q3ZCT8 623 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 CMTR2Q8IYT2 770 aaKnown RBP25.25■■□□□ 1.63
RTN2-204ENST00000587597 C4orf33Q8N1A6 199 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 GDAP1Q8TB36 358 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 CKAP2Q8WWK9 683 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 RANBP2P49792 3224 aaKnown RBP25.25■■□□□ 1.63
RTN2-204ENST00000587597 SLC38A8A6NNN8 435 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 CALRP27797 417 aaKnown RBP25.25■■□□□ 1.63
RTN2-204ENST00000587597 CCR1P32246 355 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 CDK16Q00536 496 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 SMARCB1Q12824 385 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 NSRP1Q9H0G5 558 aaKnown RBP25.25■■□□□ 1.63
RTN2-204ENST00000587597 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.25■■□□□ 1.63
RTN2-204ENST00000587597 TTLL3Q9Y4R7 772 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 IKBKGQ9Y6K9 419 aa25.25■■□□□ 1.63
RTN2-204ENST00000587597 A0A1W2PPM1 405 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 F5H423 210 aaPredicted RBP25.24■■□□□ 1.63
RTN2-204ENST00000587597 SERPINB6P35237 376 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 SLC18A1P54219 525 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 MIB1Q86YT6 1006 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 ZNF567Q8N184 647 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 MAB21L3Q8N8X9 362 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 DEPDC1BQ8WUY9 529 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 CCSER2Q9H7U1 834 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 EIF2B3Q9NR50 452 aaKnown RBP25.24■■□□□ 1.63
RTN2-204ENST00000587597 KCNU1A8MYU2 1149 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 RTN3O95197 1032 aaPredicted RBP25.24■■□□□ 1.63
RTN2-204ENST00000587597 C2orf15Q8WU43 125 aaKnown RBP25.24■■□□□ 1.63
RTN2-204ENST00000587597 SLC44A1Q8WWI5 657 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 FCRL2Q96LA5 508 aaPredicted RBP25.24■■□□□ 1.63
RTN2-204ENST00000587597 SIGLEC10Q96LC7 697 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 OSBPL2Q9H1P3 480 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 SPG21Q9NZD8 308 aa25.24■■□□□ 1.63
RTN2-204ENST00000587597 GSTA2P09210 222 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 LINC00271P0C7V0 271 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 MX2P20592 715 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 GRIA1P42261 906 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 PPIDQ08752 370 aaKnown RBP25.23■■□□□ 1.63
RTN2-204ENST00000587597 PARP6Q2NL67 630 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 BRMS1LQ5PSV4 323 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 RWDD4Q6NW29 188 aaKnown RBP25.23■■□□□ 1.63
RTN2-204ENST00000587597 MSANTD2Q6P1R3 559 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 C14orf80Q86SX3 495 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 ZNF461Q8TAF7 563 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 MZB1Q8WU39 189 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 SLC39A13Q96H72 371 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 OXCT2Q9BYC2 517 aaPredicted RBP25.23■■□□□ 1.63
RTN2-204ENST00000587597 MCOLN1Q9GZU1 580 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 BRD8Q9H0E9 1235 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 MAD1L1Q9Y6D9 718 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 SHROOM3Q8TF72 1996 aa25.23■■□□□ 1.63
RTN2-204ENST00000587597 ABLIM3O94929 683 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 ATP6V1G2O95670 118 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 INHBAP08476 426 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 LAG3P18627 525 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 PAX7P23759 505 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 PSMB4P28070 264 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 RPL10AP62906 217 aaKnown RBP25.22■■□□□ 1.63
RTN2-204ENST00000587597 PDCD7Q8N8D1 485 aaKnown RBP25.22■■□□□ 1.63
RTN2-204ENST00000587597 CELF6Q96J87 481 aaKnown RBP25.22■■□□□ 1.63
RTN2-204ENST00000587597 SERPINB11Q96P15 392 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 EBNA1BP2Q99848 306 aaKnown RBP25.22■■□□□ 1.63
RTN2-204ENST00000587597 PLAC1Q9HBJ0 212 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 SSU72Q9NP77 194 aaKnown RBP25.22■■□□□ 1.63
RTN2-204ENST00000587597 IGSF9Q9P2J2 1179 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 HS3ST4Q9Y661 456 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 TCP11X1B4DZS4 312 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 KCNK1O00180 336 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 BAIAP3O94812 1187 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 GSTA1P08263 222 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 MLNP12872 115 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 KRT4P19013 534 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 IRX1P78414 480 aaPredicted RBP25.22■■□□□ 1.63
RTN2-204ENST00000587597 ELF3P78545 371 aaPredicted RBP25.22■■□□□ 1.63
RTN2-204ENST00000587597 HDAC11Q96DB2 347 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 RSRC1Q96IZ7 334 aaKnown RBP25.22■■□□□ 1.63
RTN2-204ENST00000587597 TLR8Q9NR97 1041 aaKnown RBP25.22■■□□□ 1.63
RTN2-204ENST00000587597 NDFIP2Q9NV92 336 aa25.22■■□□□ 1.63
RTN2-204ENST00000587597 KLHL8Q9P2G9 620 aaPredicted RBP25.22■■□□□ 1.63
RTN2-204ENST00000587597 IQANK1A0A1B0GTG1 560 aa25.21■■□□□ 1.63
RTN2-204ENST00000587597 TRDMT1O14717 391 aaKnown RBP25.21■■□□□ 1.63
RTN2-204ENST00000587597 EFCAB14O75071 495 aa25.21■■□□□ 1.63
RTN2-204ENST00000587597 HMBSP08397 361 aa25.21■■□□□ 1.63
RTN2-204ENST00000587597 CA4P22748 312 aa25.21■■□□□ 1.63
RTN2-204ENST00000587597 GBP2P32456 591 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms