RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 ADGRG4Q8IZF6 3080 aa5.5□□□□□ -1.53
TRIM25-208ENST00000574234 CSMD2Q7Z408 3487 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 SCN1AP35498 2009 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.49□□□□□ -1.53
TRIM25-208ENST00000574234 A0A1W2PQF6 199 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 CCDC66A2RUB6 948 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.49□□□□□ -1.53
TRIM25-208ENST00000574234 PMM2O15305 246 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 EDIL3O43854 480 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 H2AFYO75367 372 aaKnown RBP5.49□□□□□ -1.53
TRIM25-208ENST00000574234 LARGE1O95461 756 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 CD3EP07766 207 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 OR4Q2P0C623 313 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 NCAM1P13591 858 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 PLS3P13797 630 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 HOXB2P14652 356 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 ATF6P18850 670 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 RXRAP19793 462 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 MARCKSP29966 332 aaPredicted RBP5.49□□□□□ -1.53
TRIM25-208ENST00000574234 GNA11P29992 359 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 CD6P30203 668 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 CTSKP43235 329 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 GPR3P46089 330 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 CLDN6P56747 220 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 SCAND1P57086 179 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 IRX6P78412 446 aaPredicted RBP5.49□□□□□ -1.53
TRIM25-208ENST00000574234 KCNAB2Q13303 367 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 PPP2R5CQ13362 524 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 TERF2Q15554 542 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 ARL13BQ3SXY8 428 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 LINC00303Q3SY05 128 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 TXNDC8Q6A555 127 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 CASC1Q6TDU7 716 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 ACAD11Q709F0 780 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 NOSTRINQ8IVI9 506 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 CMIPQ8IY22 773 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 RCBTB1Q8NDN9 531 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 CCDC12Q8WUD4 166 aaPredicted RBP5.49□□□□□ -1.53
TRIM25-208ENST00000574234 MRPS31Q92665 395 aaKnown RBP5.49□□□□□ -1.53
TRIM25-208ENST00000574234 FBXW5Q969U6 566 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 RILPL2Q969X0 211 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 NAF1Q96HR8 494 aaKnown RBP5.49□□□□□ -1.53
TRIM25-208ENST00000574234 ACAP3Q96P50 834 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 ZNF768Q9H5H4 540 aaKnown RBP5.49□□□□□ -1.53
TRIM25-208ENST00000574234 IPPKQ9H8X2 491 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 C6orf50Q9HD87 102 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 TOPORSQ9NS56 1045 aaPredicted RBP5.49□□□□□ -1.53
TRIM25-208ENST00000574234 DIAPH3Q9NSV4 1193 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 KLHL11Q9NVR0 708 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 RBM28Q9NW13 759 aaKnown RBP5.49□□□□□ -1.53
TRIM25-208ENST00000574234 DNM3Q9UQ16 869 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 GDAQ9Y2T3 454 aa5.49□□□□□ -1.53
TRIM25-208ENST00000574234 STK36Q9NRP7 1315 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 MED13LQ71F56 2210 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 F8P00451 2351 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 SCN8AQ9UQD0 1980 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 NYNRINQ9P2P1 1898 aaKnown RBP5.48□□□□□ -1.53
TRIM25-208ENST00000574234 CYP3A7-CYP3A51PA0A087WV96 503 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 TRAV19A0A0A6YYK7 116 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 ACKR2O00590 384 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 SH2B2O14492 632 aaPredicted RBP5.48□□□□□ -1.53
TRIM25-208ENST00000574234 XPOTO43592 962 aaKnown RBP5.48□□□□□ -1.53
TRIM25-208ENST00000574234 PPFIA2O75334 1257 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 SOAT2O75908 522 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 LDOC1O95751 146 aaPredicted RBP5.48□□□□□ -1.53
TRIM25-208ENST00000574234 KCNE1P15382 129 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 HMGA1P17096 107 aaKnown RBP5.48□□□□□ -1.53
TRIM25-208ENST00000574234 CD53P19397 219 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 CYP3A7P24462 503 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 NMT1P30419 496 aaKnown RBP5.48□□□□□ -1.53
TRIM25-208ENST00000574234 NTSR1P30989 418 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 AARSP49588 968 aaKnown RBP eCLIP5.48□□□□□ -1.53
TRIM25-208ENST00000574234 PHC1P78364 1004 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 SMARCB1Q12824 385 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 PRPF4BQ13523 1007 aaKnown RBP5.48□□□□□ -1.53
TRIM25-208ENST00000574234 TAF12Q16514 161 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 KIF19Q2TAC6 998 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 XKR9Q5GH70 373 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 RNFT1Q5M7Z0 435 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 EMC10Q5UCC4 262 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 DCAF12L1Q5VU92 463 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 HIST2H2BCQ6DN03 193 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 MOXD1Q6UVY6 613 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 NFXL1Q6ZNB6 911 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 SFTPA1Q8IWL2 248 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 TTC9BQ8N6N2 239 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 ATAD1Q8NBU5 361 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 GALNT6Q8NCL4 622 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 SPATA20Q8TB22 786 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 ETNPPLQ8TBG4 499 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 BICD2Q8TD16 824 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 IPO4Q8TEX9 1081 aaKnown RBP5.48□□□□□ -1.53
TRIM25-208ENST00000574234 C2orf15Q8WU43 125 aaKnown RBP5.48□□□□□ -1.53
TRIM25-208ENST00000574234 CNDP2Q96KP4 475 aaKnown RBP5.48□□□□□ -1.53
TRIM25-208ENST00000574234 MRGPRX1Q96LB2 322 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 TEKT5Q96M29 485 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 TAAR9Q96RI9 348 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 MMS19Q96T76 1030 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 LXNQ9BS40 222 aa5.48□□□□□ -1.53
TRIM25-208ENST00000574234 PCED1AQ9H1Q7 454 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms