RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 CCR5P51681 352 aa22.7■■□□□ 1.22
SNF8-216ENST00000573795 METAP1P53582 386 aa22.7■■□□□ 1.22
SNF8-216ENST00000573795 C21orf59P57076 290 aa22.7■■□□□ 1.22
SNF8-216ENST00000573795 DHRS13Q6UX07 377 aa22.7■■□□□ 1.22
SNF8-216ENST00000573795 PDZD3Q86UT5 571 aa22.7■■□□□ 1.22
SNF8-216ENST00000573795 CCDC117Q8IWD4 279 aaPredicted RBP22.7■■□□□ 1.22
SNF8-216ENST00000573795 FAM131CQ96AQ9 280 aa22.7■■□□□ 1.22
SNF8-216ENST00000573795 URB1O60287 2271 aaKnown RBP22.69■■□□□ 1.22
SNF8-216ENST00000573795 DOCK9Q9BZ29 2069 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 BICDL2A1A5D9 508 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 CBX4O00257 560 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 MOCS3O95396 460 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 GOT1P17174 413 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 PPP2CBP62714 309 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 YWHAZP63104 245 aaKnown RBP22.69■■□□□ 1.22
SNF8-216ENST00000573795 PPP2CAP67775 309 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 SFSWAPQ12872 951 aaKnown RBP22.69■■□□□ 1.22
SNF8-216ENST00000573795 PDCLQ13371 301 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 CXorf57Q6NSI4 855 aaKnown RBP22.69■■□□□ 1.22
SNF8-216ENST00000573795 CCAR2Q8N163 923 aaKnown RBP22.69■■□□□ 1.22
SNF8-216ENST00000573795 SAP25Q8TEE9 199 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 FRS2Q8WU20 508 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 TRIM62Q9BVG3 475 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 UBE2TQ9NPD8 197 aaPredicted RBP22.69■■□□□ 1.22
SNF8-216ENST00000573795 FTSJ1Q9UET6 329 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 CEP83Q9Y592 693 aa22.69■■□□□ 1.22
SNF8-216ENST00000573795 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.69■■□□□ 1.22
SNF8-216ENST00000573795 BECN2A8MW95 431 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 KCNU1A8MYU2 1149 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 BIN1O00499 593 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 GNA14O95837 355 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 ADH1BP00325 375 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 PDGFRAP16234 1089 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 C5AR1P21730 350 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 CD38P28907 300 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 GNA15P30679 374 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 CYP4F3Q08477 520 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 ELAVL3Q14576 367 aaKnown RBP22.68■■□□□ 1.22
SNF8-216ENST00000573795 CCDC157Q569K6 752 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 GJB7Q6PEY0 223 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 SND1Q7KZF4 910 aaKnown RBP eCLIP22.68■■□□□ 1.22
SNF8-216ENST00000573795 WDTC1Q8N5D0 677 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 SRRTQ9BXP5 876 aaKnown RBP22.68■■□□□ 1.22
SNF8-216ENST00000573795 THAP9Q9H5L6 903 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 AASDHPPTQ9NRN7 309 aa22.68■■□□□ 1.22
SNF8-216ENST00000573795 F5H5T6 163 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 PLK4O00444 970 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 THAP12O43422 761 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 MED7O43513 233 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 LATO43561 262 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 IRAK1P51617 712 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 PLK1P53350 603 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 PAK1Q13153 545 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 SLC12A1Q13621 1099 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 INAVAQ3KP66 663 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 SOWAHCQ53LP3 525 aaPredicted RBP22.67■■□□□ 1.22
SNF8-216ENST00000573795 RNF219Q5W0B1 726 aaPredicted RBP22.67■■□□□ 1.22
SNF8-216ENST00000573795 ATP6V0D2Q8N8Y2 350 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 OR52K2Q8NGK3 314 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 OR14C36Q8NHC7 312 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 HNRNPLLQ8WVV9 542 aaKnown RBP22.67■■□□□ 1.22
SNF8-216ENST00000573795 ALG14Q96F25 216 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 SLC2A13Q96QE2 648 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 MED15Q96RN5 788 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 SCUBE2Q9NQ36 999 aa22.67■■□□□ 1.22
SNF8-216ENST00000573795 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.67■■□□□ 1.22
SNF8-216ENST00000573795 ARID1BQ8NFD5 2236 aaPredicted RBP22.67■■□□□ 1.22
SNF8-216ENST00000573795 IL1BP01584 269 aa22.66■■□□□ 1.22
SNF8-216ENST00000573795 EPHA8P29322 1005 aaPredicted RBP22.66■■□□□ 1.22
SNF8-216ENST00000573795 CLDN6P56747 220 aa22.66■■□□□ 1.22
SNF8-216ENST00000573795 NXPH1P58417 271 aa22.66■■□□□ 1.22
SNF8-216ENST00000573795 NUCB2P80303 420 aa22.66■■□□□ 1.22
SNF8-216ENST00000573795 APBA1Q02410 837 aa22.66■■□□□ 1.22
SNF8-216ENST00000573795 CENPCQ03188 943 aa22.66■■□□□ 1.22
SNF8-216ENST00000573795 DEFB106AQ8N104 65 aa22.66■■□□□ 1.22
SNF8-216ENST00000573795 CPXM1Q96SM3 734 aa22.66■■□□□ 1.22
SNF8-216ENST00000573795 ARHGAP20Q9P2F6 1191 aa22.66■■□□□ 1.22
SNF8-216ENST00000573795 SARDHQ9UL12 918 aa22.66■■□□□ 1.22
SNF8-216ENST00000573795 KNTC1P50748 2209 aa22.66■■□□□ 1.22
SNF8-216ENST00000573795 BPTFQ12830 3046 aa22.66■■□□□ 1.22
SNF8-216ENST00000573795 A0A1B0GVM2 712 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 TCAF2A6NFQ2 919 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 ENC1O14682 589 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 DNAJC3Q13217 504 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 ACAP1Q15027 740 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 FBXL22Q6P050 247 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 TRIM65Q6PJ69 517 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 SKA1Q96BD8 255 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 SERAC1Q96JX3 654 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 SPAG5Q96R06 1193 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 CRACR2AQ9BSW2 395 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 FAM204AQ9H8W3 233 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 GDF3Q9NR23 364 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 PCDHGA1Q9Y5H4 931 aa22.65■■□□□ 1.22
SNF8-216ENST00000573795 GADD45BO75293 160 aaPredicted RBP22.64■■□□□ 1.21
SNF8-216ENST00000573795 SLC9A1P19634 815 aa22.64■■□□□ 1.21
SNF8-216ENST00000573795 VASPP50552 380 aaPredicted RBP22.64■■□□□ 1.21
SNF8-216ENST00000573795 SULT2A1Q06520 285 aa22.64■■□□□ 1.21
SNF8-216ENST00000573795 TTC39BQ5VTQ0 682 aaPredicted RBP22.64■■□□□ 1.21
SNF8-216ENST00000573795 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms