RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 CEP250Q9BV73 2442 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 NUMA1Q14980 2115 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 TCRBV21S2A2A0A5A6 115 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 TMEM110-MUSTN1A8MSY1 372 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 TTC34A8MYJ7 566 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 PROB1E7EW31 1015 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 DCLK1O15075 740 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 HRO43593 1189 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 CREB3O43889 395 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 LILRB5O75023 590 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 CD160O95971 181 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 MT-CO1P00395 513 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 CD48P09326 243 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 RARAP10276 462 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 HOXB2P14652 356 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 GABRG2P18507 467 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 NTSR1P30989 418 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 L1CAMP32004 1257 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 ACVRL1P37023 503 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 NBL1P41271 181 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 MAGEA1P43355 309 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 ARSEP51690 589 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 PLK1P53350 603 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 COPAP53621 1224 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 RABGAP1LQ5R372 815 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 RNF219Q5W0B1 726 aaPredicted RBP7.18□□□□□ -1.26
SMG6-209ENST00000571442 ANO7Q6IWH7 933 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 RWDD4Q6NW29 188 aaKnown RBP7.18□□□□□ -1.26
SMG6-209ENST00000571442 ASCL5Q7RTU5 278 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 RASSF3Q86WH2 238 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 CHPFQ8IZ52 775 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 AHI1Q8N157 1196 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 NIPA2Q8N8Q9 360 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 ZBTB44Q8NCP5 570 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 WFIKKN2Q8TEU8 576 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 NKD2Q969F2 451 aaPredicted RBP7.18□□□□□ -1.26
SMG6-209ENST00000571442 RPL10LQ96L21 214 aaKnown RBP7.18□□□□□ -1.26
SMG6-209ENST00000571442 FEM1AQ9BSK4 669 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 DESI2Q9BSY9 194 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 IER2Q9BTL4 223 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 TPSD1Q9BZJ3 242 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 ZYG11BQ9C0D3 744 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 LACRTQ9GZZ8 138 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 MKRN2Q9H000 416 aaKnown RBP7.18□□□□□ -1.26
SMG6-209ENST00000571442 DHX35Q9H5Z1 703 aaKnown RBP7.18□□□□□ -1.26
SMG6-209ENST00000571442 ZWILCHQ9H900 591 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 GRPEL1Q9HAV7 217 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 MRPL47Q9HD33 250 aaKnown RBP7.18□□□□□ -1.26
SMG6-209ENST00000571442 ETNK2Q9NVF9 386 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 KLHL11Q9NVR0 708 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 KIAA1522Q9P206 1035 aaPredicted RBP7.18□□□□□ -1.26
SMG6-209ENST00000571442 CTTNBP2NLQ9P2B4 639 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 PPARGC1AQ9UBK2 798 aaKnown RBP7.18□□□□□ -1.26
SMG6-209ENST00000571442 TRIM10Q9UDY6 481 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 EBF1Q9UH73 591 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 DNAI1Q9UI46 699 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 AP4E1Q9UPM8 1137 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 SLC8A2Q9UPR5 921 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 ERVW-1Q9UQF0 538 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 PCDHA13Q9Y5I0 950 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 EPN1Q9Y6I3 576 aaPredicted RBP7.18□□□□□ -1.26
SMG6-209ENST00000571442 DUSP10Q9Y6W6 482 aa7.18□□□□□ -1.26
SMG6-209ENST00000571442 SDK1Q7Z5N4 2213 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 PLXND1Q9Y4D7 1925 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 OTOGLQ3ZCN5 2332 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 ZNF292O60281 2723 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 TYW5A2RUC4 315 aaKnown RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 EIF3CLB5ME19 914 aaKnown RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 K7ERQ8 282 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 ATG13O75143 517 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 CLDN11O75508 207 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 ZMPSTE24O75844 475 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 MTA2O94776 668 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 PROSCO94903 275 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 NDUFA10O95299 355 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 RHOCP08134 193 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 DLDP09622 509 aaKnown RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 GOT1P17174 413 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 POLR2EP19388 210 aaKnown RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 NDUFV2P19404 249 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 BCKDHBP21953 392 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 IL4RP24394 825 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 PCK1P35558 622 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 GJC1P36383 396 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 METAP1P53582 386 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 ARF5P84085 180 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 MMRN1Q13201 1228 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 ZNF177Q13360 481 aaPredicted RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 MESDQ14696 234 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 EIF4HQ15056 248 aaKnown RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 TSR1Q2NL82 804 aaKnown RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 ZNF528Q3MIS6 628 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 ARL13BQ3SXY8 428 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 EFHC2Q5JST6 749 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 EOGTQ5NDL2 527 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 FAM182AQ5T1J6 154 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 ERMARDQ5T6L9 678 aa7.17□□□□□ -1.26
SMG6-209ENST00000571442 TTC39BQ5VTQ0 682 aaPredicted RBP7.17□□□□□ -1.26
SMG6-209ENST00000571442 LINGO4Q6UY18 593 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms