RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 CNR2P34972 360 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 EIF2DP41214 584 aaKnown RBP13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 SLC6A11P48066 632 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 PXNP49023 591 aaPredicted RBP13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 MESP2Q0VG99 397 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 SIM2Q14190 667 aaPredicted RBP13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 DPYSL2Q16555 572 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 LPAL2Q16609 132 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 IFI16Q16666 785 aaKnown RBP13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 ALFQ53S48 1182 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 KCNT1Q5JUK3 1230 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 LRRC38Q5VT99 294 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 LRRC31Q6UY01 552 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 PRR23BQ6ZRT6 265 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 DAAM2Q86T65 1068 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 CIR1Q86X95 450 aaPredicted RBP13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 REXO1L1PQ8IX06 675 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 FAM71BQ8TC56 605 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 WFDC5Q8TCV5 224 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 XPO6Q96QU8 1125 aaKnown RBP13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 HHIPQ96QV1 700 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 SLC2A11Q9BYW1 496 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 DHX35Q9H5Z1 703 aaKnown RBP13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 ZWILCHQ9H900 591 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 LZTFL1Q9NQ48 299 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 DNAJC17Q9NVM6 304 aaKnown RBP13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 PPARGC1AQ9UBK2 798 aaKnown RBP13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 ZNF212Q9UDV6 495 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 RAB23Q9ULC3 237 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 CLEC4EQ9ULY5 219 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 GUCA1BQ9UMX6 200 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 SLC8A2Q9UPR5 921 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 CACNA1AO00555 2505 aa13.25□□□□□ -0.29
CNEP1R1-211ENST00000569647 CCDC163A0A0D9SF12 145 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 TYW5A2RUC4 315 aaKnown RBP13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 ANTXRLA6NF34 631 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 SPOPO43791 374 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 SRGAP2O75044 1071 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 PALMO75781 387 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 LUC7L3O95232 432 aaKnown RBP13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 KRT7P08729 469 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 CISD3P0C7P0 127 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 HTR7P34969 479 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 SSR1P43307 286 aaKnown RBP13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 ARSEP51690 589 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 NAP1L1P55209 391 aaKnown RBP13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 SEC13P55735 322 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 ATP13A4Q4VNC1 1196 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 LAIR1Q6GTX8 287 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 CHST9Q7L1S5 443 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 SYT13Q7L8C5 426 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 SFTPA1Q8IWL2 248 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 CCAR2Q8N163 923 aaKnown RBP13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 NAT16Q8N8M0 369 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 USP33Q8TEY7 942 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 HSPH1Q92598 858 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 ACDQ96AP0 544 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 TBC1D31Q96DN5 1066 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 LMLNQ96KR4 655 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 EPAS1Q99814 870 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 ZYG11BQ9C0D3 744 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 PCDH18Q9HCL0 1135 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 MPP6Q9NZW5 540 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 STIM2Q9P246 746 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 SLC27A6Q9Y2P4 619 aa13.24□□□□□ -0.29
CNEP1R1-211ENST00000569647 CEP192Q8TEP8 1941 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 PLXND1Q9Y4D7 1925 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 TRIM24O15164 1050 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 ZSCAN12O43309 604 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 PSTPIP1O43586 416 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 CREB3O43889 395 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 CLDN11O75508 207 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 RHOQP17081 205 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 GJC1P36383 396 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 DGKGP49619 791 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 ZNF135P52742 658 aaPredicted RBP13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 CDH4P55283 916 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 DMC1Q14565 340 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 C2orf27AQ580R0 203 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 PPP6R3Q5H9R7 873 aaPredicted RBP13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 CXorf57Q6NSI4 855 aaKnown RBP13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 KIAA0907Q7Z7F0 614 aaPredicted RBP13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 NT5DC3Q86UY8 548 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 NLRP14Q86W24 1093 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 RHOT1Q8IXI2 618 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 CAMKK1Q8N5S9 505 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 CCDC26Q8TAB7 109 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 FIBINQ8TAL6 211 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 KIAA1524Q8TCG1 905 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 TSC1Q92574 1164 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 PNKPQ96T60 521 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 RETREG1Q9H6L5 497 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 TMEM248Q9NWD8 314 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 CWC15Q9P013 229 aaKnown RBP13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 DEC1Q9P2X7 70 aa13.23□□□□□ -0.29
CNEP1R1-211ENST00000569647 GMEB2Q9UKD1 530 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms