RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 DDIT4Q9NX09 232 aa13.31□□□□□ -0.28
TSC2-220ENST00000568238 COX16Q9P0S2 106 aa13.31□□□□□ -0.28
TSC2-220ENST00000568238 SUN2Q9UH99 717 aa13.31□□□□□ -0.28
TSC2-220ENST00000568238 SLC12A6Q9UHW9 1150 aa13.31□□□□□ -0.28
TSC2-220ENST00000568238 KNL1Q8NG31 2342 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 TMEM131Q92545 1883 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 GOLGA6L3A6NEY3 463 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 METTL12A8MUP2 240 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 KCNU1A8MYU2 1149 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 GRAP2O75791 330 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 MOCS3O95396 460 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 ADCY5O95622 1261 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 SKILP12757 684 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 ABCB4P21439 1286 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 CCR1P32246 355 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 SNX16P57768 344 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 RPS14P62263 151 aaKnown RBP13.3□□□□□ -0.28
TSC2-220ENST00000568238 KLHL30Q0D2K2 578 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 FOXC1Q12948 553 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 HNRNPA1L2Q32P51 320 aaKnown RBP13.3□□□□□ -0.28
TSC2-220ENST00000568238 TDRD12Q587J7 1177 aaKnown RBP13.3□□□□□ -0.28
TSC2-220ENST00000568238 FSCBQ5H9T9 825 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 PITRM1Q5JRX3 1037 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 EFHC1Q5JVL4 640 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 TTC39BQ5VTQ0 682 aaPredicted RBP13.3□□□□□ -0.28
TSC2-220ENST00000568238 NAA35Q5VZE5 725 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 OLFML1Q6UWY5 402 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 MMS22LQ6ZRQ5 1243 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 DEFB106AQ8N104 65 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 ATP6V0D2Q8N8Y2 350 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 TMEM35BQ8NCS4 154 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 SNX19Q92543 992 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 MYO19Q96H55 970 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 AGPAT1Q99943 283 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 SYNCQ9H7C4 482 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.3□□□□□ -0.28
TSC2-220ENST00000568238 AIPL1Q9NZN9 384 aa13.3□□□□□ -0.28
TSC2-220ENST00000568238 KIAA1522Q9P206 1035 aaPredicted RBP13.3□□□□□ -0.28
TSC2-220ENST00000568238 INTS6Q9UL03 887 aaKnown RBP13.3□□□□□ -0.28
TSC2-220ENST00000568238 PLXNA2O75051 1894 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 CHD6Q8TD26 2715 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 BCAT2O15382 392 aaPredicted RBP13.29□□□□□ -0.28
TSC2-220ENST00000568238 MFAP3LO75121 409 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 DAB1O75553 588 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 SEMA4FO95754 770 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 LSM8O95777 96 aaKnown RBP13.29□□□□□ -0.28
TSC2-220ENST00000568238 ERBB2P04626 1255 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 ACSL1P33121 698 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 ADKP55263 362 aaKnown RBP13.29□□□□□ -0.28
TSC2-220ENST00000568238 NOMO3P69849 1222 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 TBX2Q13207 712 aaPredicted RBP13.29□□□□□ -0.28
TSC2-220ENST00000568238 EIF4EBP2Q13542 120 aaPredicted RBP13.29□□□□□ -0.28
TSC2-220ENST00000568238 ST3GAL2Q16842 350 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 PTPN20Q4JDL3 420 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 RABGAP1LQ5R372 815 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 RNF219Q5W0B1 726 aaPredicted RBP13.29□□□□□ -0.28
TSC2-220ENST00000568238 OR6B2Q6IFH4 312 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 SLC26A9Q7LBE3 791 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 CIR1Q86X95 450 aaPredicted RBP13.29□□□□□ -0.28
TSC2-220ENST00000568238 DRC7Q8IY82 874 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 KDM1BQ8NB78 822 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 CPA5Q8WXQ8 436 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 SYN2Q92777 582 aaPredicted RBP13.29□□□□□ -0.28
TSC2-220ENST00000568238 RNF34Q969K3 372 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 MRGPRX3Q96LB0 322 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 PCDHB18PQ96TA0 734 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 BTBD1Q9H0C5 482 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 RSPH9Q9H1X1 276 aaPredicted RBP13.29□□□□□ -0.28
TSC2-220ENST00000568238 HAUS4Q9H6D7 363 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 C6orf106Q9H6K1 298 aaPredicted RBP13.29□□□□□ -0.28
TSC2-220ENST00000568238 GRPEL1Q9HAV7 217 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 EIF2B4Q9UI10 523 aaKnown RBP13.29□□□□□ -0.28
TSC2-220ENST00000568238 DMXL2Q8TDJ6 3036 aa13.29□□□□□ -0.28
TSC2-220ENST00000568238 EDDM13A0A1B0GTR0 161 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 A0A1B0GVM2 712 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 TCAF2A6NFQ2 919 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 AKR1B15C9JRZ8 316 aaPredicted RBP13.28□□□□□ -0.28
TSC2-220ENST00000568238 RNASEH1O60930 286 aaKnown RBP13.28□□□□□ -0.28
TSC2-220ENST00000568238 SIN3BO75182 1162 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 GJB3O75712 270 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 SRPRAP08240 638 aaKnown RBP13.28□□□□□ -0.28
TSC2-220ENST00000568238 PRKCIP41743 596 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 CTSOP43234 321 aaPredicted RBP13.28□□□□□ -0.28
TSC2-220ENST00000568238 SIM1P81133 766 aaPredicted RBP13.28□□□□□ -0.28
TSC2-220ENST00000568238 ECT2LQ008S8 904 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 SLC6A3Q01959 620 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 MTA1Q13330 715 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 SLC14A1Q13336 389 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 ARID5BQ14865 1188 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 TRIM72Q6ZMU5 477 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 ZNF571Q7Z3V5 609 aaPredicted RBP13.28□□□□□ -0.28
TSC2-220ENST00000568238 ZDHHC17Q8IUH5 632 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 SPC24Q8NBT2 197 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 SLC30A5Q8TAD4 765 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 DNAJC7Q99615 494 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 PRMT1Q99873 361 aaKnown RBP13.28□□□□□ -0.28
TSC2-220ENST00000568238 PABPC3Q9H361 631 aaKnown RBP13.28□□□□□ -0.28
TSC2-220ENST00000568238 MTG2Q9H4K7 406 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 SGK2Q9HBY8 427 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 SCML1Q9UN30 329 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms