RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ZSCAN18Q8TBC5 510 aaPredicted RBP19.24■□□□□ 0.67
COMMD4-213ENST00000565834 HTR3CQ8WXA8 447 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 RTP4Q96DX8 246 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 SLC39A8Q9C0K1 460 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 CLEC1BQ9P126 229 aa19.24■□□□□ 0.67
COMMD4-213ENST00000565834 CHD5Q8TDI0 1954 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 A0A1B0GVM2 712 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 TCAF2A6NFQ2 919 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 CLDN11O75508 207 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 VAV1P15498 845 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 TCF3P15923 654 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 POU3F3P20264 500 aaPredicted RBP19.23■□□□□ 0.67
COMMD4-213ENST00000565834 IGFBP4P22692 258 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 WEE1P30291 646 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 ACTN2P35609 894 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 CHKAP35790 457 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 CARSP49589 748 aaKnown RBP19.23■□□□□ 0.67
COMMD4-213ENST00000565834 SGSHP51688 502 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 USP4Q13107 963 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 ADGRE1Q14246 886 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 ZNF77Q15935 545 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 CES5AQ6NT32 575 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 POTEHQ6S545 545 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 CCNI2Q6ZMN8 369 aaPredicted RBP19.23■□□□□ 0.67
COMMD4-213ENST00000565834 EP400NLQ6ZTU2 488 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 CHST9Q7L1S5 443 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 GET4Q7L5D6 327 aaPredicted RBP19.23■□□□□ 0.67
COMMD4-213ENST00000565834 NPAS3Q8IXF0 933 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 SNF8Q96H20 258 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 ADAM7Q9H2U9 754 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 NOL6Q9H6R4 1146 aaKnown RBP19.23■□□□□ 0.67
COMMD4-213ENST00000565834 KIF9Q9HAQ2 790 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 ARGLU1Q9NWB6 273 aaPredicted RBP19.23■□□□□ 0.67
COMMD4-213ENST00000565834 CLDND1Q9NY35 253 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 CDH22Q9UJ99 828 aa19.23■□□□□ 0.67
COMMD4-213ENST00000565834 RAMP2O60895 175 aa19.22■□□□□ 0.67
COMMD4-213ENST00000565834 TBX10O75333 385 aa19.22■□□□□ 0.67
COMMD4-213ENST00000565834 GPS1Q13098 491 aa19.22■□□□□ 0.67
COMMD4-213ENST00000565834 HLTFQ14527 1009 aaKnown RBP eCLIP19.22■□□□□ 0.67
COMMD4-213ENST00000565834 BRD3Q15059 726 aa19.22■□□□□ 0.67
COMMD4-213ENST00000565834 CTC1Q2NKJ3 1217 aa19.22■□□□□ 0.67
COMMD4-213ENST00000565834 ATAT1Q5SQI0 421 aa19.22■□□□□ 0.67
COMMD4-213ENST00000565834 LRRC49Q8IUZ0 686 aa19.22■□□□□ 0.67
COMMD4-213ENST00000565834 TDRD5Q8NAT2 981 aaKnown RBP19.22■□□□□ 0.67
COMMD4-213ENST00000565834 FGF13Q92913 245 aa19.22■□□□□ 0.67
COMMD4-213ENST00000565834 TMA16Q96EY4 203 aaKnown RBP19.22■□□□□ 0.67
COMMD4-213ENST00000565834 P2RY11Q96G91 374 aa19.22■□□□□ 0.67
COMMD4-213ENST00000565834 MYO18AQ92614 2054 aaKnown RBP19.21■□□□□ 0.67
COMMD4-213ENST00000565834 CCDC151A5D8V7 595 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 ARHGAP42A6NI28 874 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 RASA4BC9J798 803 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 GFRA2O00451 464 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 SOX1O00570 391 aaPredicted RBP19.21■□□□□ 0.67
COMMD4-213ENST00000565834 RASA4O43374 803 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 TBL1XO60907 577 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 STK10O94804 968 aaKnown RBP19.21■□□□□ 0.67
COMMD4-213ENST00000565834 RPL22P35268 128 aaKnown RBP19.21■□□□□ 0.67
COMMD4-213ENST00000565834 NRLP54845 237 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 ZNF33AQ06730 810 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 CALCOCO2Q13137 446 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 P3H1Q32P28 736 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 CCDC13Q8IYE1 715 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 CELF5Q8N6W0 485 aaKnown RBP19.21■□□□□ 0.67
COMMD4-213ENST00000565834 EIF1ADQ8N9N8 165 aaKnown RBP19.21■□□□□ 0.67
COMMD4-213ENST00000565834 RIN3Q8TB24 985 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 DEPDC1BQ8WUY9 529 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 LRRC45Q96CN5 670 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 SEPT10Q9P0V9 454 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 NFU1Q9UMS0 254 aa19.21■□□□□ 0.67
COMMD4-213ENST00000565834 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-213ENST00000565834 MTSS1O43312 755 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 ERLIN1O75477 346 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 MYBL2P10244 700 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 IVDP26440 423 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 PAPOLAP51003 745 aaKnown RBP19.2■□□□□ 0.66
COMMD4-213ENST00000565834 YBEYP58557 167 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-213ENST00000565834 DLX2Q07687 328 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-213ENST00000565834 ZNF177Q13360 481 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-213ENST00000565834 POLD3Q15054 466 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-213ENST00000565834 PARP15Q460N3 678 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 C6orf118Q5T5N4 469 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 GSPT2Q8IYD1 628 aaKnown RBP19.2■□□□□ 0.66
COMMD4-213ENST00000565834 BBOF1Q8ND07 529 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 TSGA13Q96PP4 275 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 S1PR5Q9H228 398 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 GDE1Q9NZC3 331 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 GRHL1Q9NZI5 618 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 WHRNQ9P202 907 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 PAK5Q9P286 719 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 TBC1D14Q9P2M4 693 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 DOCK8Q8NF50 2099 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 BRWD1Q9NSI6 2320 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 C5orf60A6NFR6 353 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 RNF103O00237 685 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 GCATO75600 419 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 SEC31AO94979 1220 aaKnown RBP19.2■□□□□ 0.66
COMMD4-213ENST00000565834 H2AFXP16104 143 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-213ENST00000565834 ITIH2P19823 946 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 CCNCP24863 283 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 MAP9Q49MG5 647 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms