RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 WASHC5Q12768 1159 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 SCAPQ12770 1279 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 ELAVL2Q12926 359 aaKnown RBP6.4□□□□□ -1.39
CHD9-217ENST00000565832 SPARCL1Q14515 664 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 MORF4L2Q15014 288 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 TEAD4Q15561 434 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 PKN2Q16513 984 aaKnown RBP6.4□□□□□ -1.39
CHD9-217ENST00000565832 ARL13BQ3SXY8 428 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 BBS9Q3SYG4 887 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 SLC45A4Q5BKX6 768 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 PIK3R6Q5UE93 754 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 PSTKQ8IV42 348 aaKnown RBP6.4□□□□□ -1.39
CHD9-217ENST00000565832 PPIL6Q8IXY8 311 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 SCML4Q8N228 414 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 MEIOBQ8N635 442 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 COLGALT1Q8NBJ5 622 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 TTC16Q8NEE8 873 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 SPPL2BQ8TCT7 592 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 TFB1MQ8WVM0 346 aaKnown RBP6.4□□□□□ -1.39
CHD9-217ENST00000565832 HTR3CQ8WXA8 447 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 NTAN1Q96AB6 310 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 ZNF419Q96HQ0 510 aaPredicted RBP6.4□□□□□ -1.39
CHD9-217ENST00000565832 ZNF558Q96NG5 402 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 MCOLN1Q9GZU1 580 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 RNF38Q9H0F5 515 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 SMOC2Q9H3U7 446 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 FBXO44Q9H4M3 255 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 RABEP2Q9H5N1 569 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 ALG13Q9NP73 1137 aaKnown RBP6.4□□□□□ -1.39
CHD9-217ENST00000565832 GKN1Q9NS71 199 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.4□□□□□ -1.39
CHD9-217ENST00000565832 ARHGEF38Q9NXL2 777 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 VANGL2Q9ULK5 521 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 ZMYND8Q9ULU4 1186 aaPredicted RBP6.4□□□□□ -1.39
CHD9-217ENST00000565832 HCN4Q9Y3Q4 1203 aa6.4□□□□□ -1.39
CHD9-217ENST00000565832 FAM92AA1XBS5 289 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 H7C4K7 107 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 RNF103O00237 685 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 NRG2O14511 850 aaPredicted RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 TRDMT1O14717 391 aaKnown RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 TEX28O15482 410 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 CNTN5O94779 1100 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 ABLIM3O94929 683 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 NUDT17P0C025 328 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 LINC00271P0C7V0 271 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 MYOGP15173 224 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 ZFXP17010 805 aaPredicted RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 ZNF16P17020 682 aaPredicted RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 HMGA1P17096 107 aaKnown RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 RFC2P35250 354 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 MLLT6P55198 1093 aaPredicted RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 GPX6P59796 221 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 MAGOHP61326 146 aaKnown RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 CRADDP78560 199 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 CAV1Q03135 178 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 PAFAH1B3Q15102 231 aaKnown RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 SMAD1Q15797 465 aaKnown RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 HIF1AQ16665 826 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 ALFQ53S48 1182 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 ANKRD20A2Q5SQ80 823 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 ANKRD20A1Q5TYW2 823 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 ANKRD20A3Q5VUR7 823 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 HEATR6Q6AI08 1181 aaKnown RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 LRIG3Q6UXM1 1119 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 TFAP2DQ7Z6R9 452 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 UBE2Q1Q7Z7E8 422 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 CAND1Q86VP6 1230 aaKnown RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 CIR1Q86X95 450 aaPredicted RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 VSIG1Q86XK7 387 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 ALDH16A1Q8IZ83 802 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 CFAP52Q8N1V2 620 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 KLHL23Q8NBE8 558 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 BBOF1Q8ND07 529 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 CCHCR1Q8TD31 782 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 ATP6V1G3Q96LB4 118 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 ZNF512Q96ME7 567 aaPredicted RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 AGAP3Q96P47 875 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 FRMD8P1Q9BZ68 369 aaPredicted RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 KLC2Q9H0B6 622 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 RRN3Q9NYV6 651 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 SPG21Q9NZD8 308 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 UBP1Q9NZI7 540 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 MARCH2Q9P0N8 246 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 LTBP2Q14767 1821 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 TNRC18O15417 2968 aaPredicted RBP6.39□□□□□ -1.39
CHD9-217ENST00000565832 ALPK3Q96L96 1907 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 CLUHO75153 1309 aa6.39□□□□□ -1.39
CHD9-217ENST00000565832 DOCK4Q8N1I0 1966 aa6.38□□□□□ -1.39
CHD9-217ENST00000565832 SLC12A8A0AV02 714 aa6.38□□□□□ -1.39
CHD9-217ENST00000565832 C2orf78A6NCI8 922 aa6.38□□□□□ -1.39
CHD9-217ENST00000565832 GRXCR1A8MXD5 290 aa6.38□□□□□ -1.39
CHD9-217ENST00000565832 ZNF487B1APH4 448 aa6.38□□□□□ -1.39
CHD9-217ENST00000565832 GOLGA8KD6RF30 607 aa6.38□□□□□ -1.39
CHD9-217ENST00000565832 DFFAO00273 331 aa6.38□□□□□ -1.39
CHD9-217ENST00000565832 ALOX15BO15296 676 aa6.38□□□□□ -1.39
CHD9-217ENST00000565832 TLR5O60602 858 aa6.38□□□□□ -1.39
CHD9-217ENST00000565832 USP12O75317 370 aa6.38□□□□□ -1.39
CHD9-217ENST00000565832 GCATO75600 419 aa6.38□□□□□ -1.39
CHD9-217ENST00000565832 FGF18O76093 207 aa6.38□□□□□ -1.39
CHD9-217ENST00000565832 FGBP02675 491 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms