RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 C10orf88Q9H8K7 445 aa10.57□□□□□ -0.72
USP3-219ENST00000561326 HAUS2Q9NVX0 235 aa10.57□□□□□ -0.72
USP3-219ENST00000561326 TBC1D14Q9P2M4 693 aa10.57□□□□□ -0.72
USP3-219ENST00000561326 A0A1B0GVM2 712 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 TCAF2A6NFQ2 919 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 DNALI1O14645 258 aaPredicted RBP10.56□□□□□ -0.72
USP3-219ENST00000561326 SLC9A3R1O14745 358 aaPredicted RBP10.56□□□□□ -0.72
USP3-219ENST00000561326 ATP8B1O43520 1251 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 OPHN1O60890 802 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 RAMP2O60895 175 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 CYBBP04839 570 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 ZSCAN5DPP0CG00 497 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 ETS1P14921 441 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 IVDP26440 423 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 WEE1P30291 646 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 SLC6A4P31645 630 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 FDFT1P37268 417 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 TNNT3P45378 269 aaPredicted RBP10.56□□□□□ -0.72
USP3-219ENST00000561326 ITGA8P53708 1063 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 GDF10P55107 478 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 OXCT1P55809 520 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 NTHL1P78549 312 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 MLLT1Q03111 559 aaPredicted RBP10.56□□□□□ -0.72
USP3-219ENST00000561326 HYAL1Q12794 435 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 SLMAPQ14BN4 828 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 MORF4L2Q15014 288 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 TRADDQ15628 312 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 MPPE1Q53F39 396 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 ALFQ53S48 1182 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 TCEAL5Q5H9L2 206 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 PRSS36Q5K4E3 855 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 ANKRD20A2Q5SQ80 823 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 BEND6Q5SZJ8 279 aaPredicted RBP10.56□□□□□ -0.72
USP3-219ENST00000561326 RARS2Q5T160 578 aaKnown RBP10.56□□□□□ -0.72
USP3-219ENST00000561326 C6orf118Q5T5N4 469 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 ANKRD20A1Q5TYW2 823 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 ANKRD20A3Q5VUR7 823 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 AFMIDQ63HM1 303 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 ITPRIPL1Q6GPH6 555 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 CES5AQ6NT32 575 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 PPP1R21Q6ZMI0 780 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 Q6ZNB5 142 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 PID1Q7Z2X4 250 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 TFAP2DQ7Z6R9 452 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 GPR149Q86SP6 731 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 SETD3Q86TU7 594 aaPredicted RBP10.56□□□□□ -0.72
USP3-219ENST00000561326 HOOK3Q86VS8 718 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 ZNF354CQ86Y25 554 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 PPIL6Q8IXY8 311 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 CFAP52Q8N1V2 620 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 CPXM2Q8N436 756 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 NPWQ8N729 165 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 C12orf76Q8N812 135 aaPredicted RBP10.56□□□□□ -0.72
USP3-219ENST00000561326 KIAA1958Q8N8K9 716 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 ADAMTS19Q8TE59 1207 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 SH3RF2Q8TEC5 729 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 AENQ8WTP8 325 aaKnown RBP10.56□□□□□ -0.72
USP3-219ENST00000561326 CAVIN3Q969G5 261 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 OTUB2Q96DC9 234 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 P2RY11Q96G91 374 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 CELF6Q96J87 481 aaKnown RBP10.56□□□□□ -0.72
USP3-219ENST00000561326 PPP1R2P1Q96PQ5 205 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 FRMD8Q9BZ67 464 aaPredicted RBP10.56□□□□□ -0.72
USP3-219ENST00000561326 PRO3102Q9H379 93 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 KIF9Q9HAQ2 790 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 GRHL1Q9NZI5 618 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 SEPT10Q9P0V9 454 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 HPCAL4Q9UM19 191 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 NEU3Q9UQ49 428 aa10.56□□□□□ -0.72
USP3-219ENST00000561326 ZFP37Q9Y6Q3 630 aaPredicted RBP10.56□□□□□ -0.72
USP3-219ENST00000561326 ANKRD36A6QL64 1941 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 A0A0A0MRY4 1105 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 ILVBLA1L0T0 632 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 GOLGA6CA6NDK9 693 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 GOLGA6BA6NDN3 693 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 RASA4BC9J798 803 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 E7EVH7 732 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 H0Y626 953 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 RNF103O00237 685 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 MATN3O15232 486 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 PSMD3O43242 534 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 RASA4O43374 803 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 TSPAN3O60637 253 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 TBL1XO60907 577 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 MOSPD3O75425 235 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 CNTN5O94779 1100 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 GOLGA6DP0CG33 693 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 CCNB1P14635 433 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 TCF3P15923 654 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 FSHRP23945 695 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 PAPOLAP51003 745 aaKnown RBP10.55□□□□□ -0.72
USP3-219ENST00000561326 RENBPP51606 427 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 BASP1P80723 227 aaKnown RBP10.55□□□□□ -0.72
USP3-219ENST00000561326 SARNPP82979 210 aaKnown RBP10.55□□□□□ -0.72
USP3-219ENST00000561326 ADAM15Q13444 863 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 SLC5A9Q2M3M2 681 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 PARP6Q2NL67 630 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 TEX44Q53QW1 395 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 ATAT1Q5SQI0 421 aa10.55□□□□□ -0.72
USP3-219ENST00000561326 MPP7Q5T2T1 576 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms