RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 CLCN6P51797 869 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 TPI1P60174 286 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 ECT2LQ008S8 904 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 SLC25A11Q02978 314 aaKnown RBP14.06□□□□□ -0.16
SHMT2-234ENST00000557703 STARD3Q14849 445 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 CRY1Q16526 586 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 PARP15Q460N3 678 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 ARTNQ5T4W7 220 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 NAIF1Q69YI7 327 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-234ENST00000557703 CXorf57Q6NSI4 855 aaKnown RBP14.06□□□□□ -0.16
SHMT2-234ENST00000557703 RWDD4Q6NW29 188 aaKnown RBP14.06□□□□□ -0.16
SHMT2-234ENST00000557703 CYP4V2Q6ZWL3 525 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-234ENST00000557703 CHPFQ8IZ52 775 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 SYCE1Q8N0S2 351 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 UMODL1-AS1Q8N2C9 162 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 RTL3Q8N8U3 475 aaKnown RBP14.06□□□□□ -0.16
SHMT2-234ENST00000557703 DCAF4L2Q8NA75 395 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 CIPCQ9C0C6 399 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 DHX35Q9H5Z1 703 aaKnown RBP14.06□□□□□ -0.16
SHMT2-234ENST00000557703 POLMQ9NP87 494 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-234ENST00000557703 RBM12Q9NTZ6 932 aaKnown RBP14.06□□□□□ -0.16
SHMT2-234ENST00000557703 DDX56Q9NY93 547 aaKnown RBP14.06□□□□□ -0.16
SHMT2-234ENST00000557703 EBF1Q9UH73 591 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 HPCAL4Q9UM19 191 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHMT2-234ENST00000557703 ATG2BQ96BY7 2078 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 EEF2KO00418 725 aaKnown RBP14.05□□□□□ -0.16
SHMT2-234ENST00000557703 DAPK3O43293 454 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 RHOCP08134 193 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 RARAP10276 462 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 CHRM1P11229 460 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-234ENST00000557703 CD70P32970 193 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 CNR2P34972 360 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 TIE1P35590 1138 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 NDST2P52849 883 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 PTPN5P54829 565 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 MESP2Q0VG99 397 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 GAS6Q14393 721 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 MESDQ14696 234 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 RAB6CQ53S08 254 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 ALFQ53S48 1182 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 C2orf27AQ580R0 203 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 PITRM1Q5JRX3 1037 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 RNF219Q5W0B1 726 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-234ENST00000557703 RETSATQ6NUM9 610 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 RFX8Q6ZV50 586 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 RHOT1Q8IXI2 618 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 CASKIN2Q8WXE0 1202 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 MYEOVQ96EZ4 313 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 ALG14Q96F25 216 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 ZNF670Q9BS34 389 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 RAB6CQ9H0N0 254 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 MUC3BQ9H195 1237 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 TMPRSS4Q9NRS4 437 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 MPP6Q9NZW5 540 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 VPS28Q9UK41 221 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 OR51B4Q9Y5P0 310 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 ADGRG1Q9Y653 693 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 MUC6Q6W4X9 2439 aa14.05□□□□□ -0.16
SHMT2-234ENST00000557703 TARSL2A2RTX5 802 aaKnown RBP14.04□□□□□ -0.16
SHMT2-234ENST00000557703 FAM72CH0Y354 149 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 TRIM24O15164 1050 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 PSTPIP1O43586 416 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 CREB3O43889 395 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 RAMP2O60895 175 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 CNTN5O94779 1100 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 KLF8O95600 359 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-234ENST00000557703 APBB3O95704 486 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 CCDC175P0C221 793 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 IL1R2P27930 398 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 SERPINB6P35237 376 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 CSKP41240 450 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 SSR1P43307 286 aaKnown RBP14.04□□□□□ -0.16
SHMT2-234ENST00000557703 GNA12Q03113 381 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 BYSLQ13895 437 aaKnown RBP14.04□□□□□ -0.16
SHMT2-234ENST00000557703 FSCBQ5H9T9 825 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 TMCO4Q5TGY1 634 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 FAM72AQ5TYM5 149 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 TMEM215Q68D42 235 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 FAM72DQ6L9T8 149 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 ZC3H14Q6PJT7 736 aaKnown RBP14.04□□□□□ -0.16
SHMT2-234ENST00000557703 Q6ZS52 159 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 FAM72BQ86X60 149 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 TPCN2Q8NHX9 752 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 WFDC5Q8TCV5 224 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 NELL1Q92832 810 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 BTBD6Q96KE9 485 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 PEBP4Q96S96 227 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 TMEM245Q9H330 911 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 SEMA4AQ9H3S1 761 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.04□□□□□ -0.16
SHMT2-234ENST00000557703 SLC25A13Q9UJS0 675 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 INTS6Q9UL03 887 aaKnown RBP14.04□□□□□ -0.16
SHMT2-234ENST00000557703 NEU3Q9UQ49 428 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 HS3ST2Q9Y278 367 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 REXO2Q9Y3B8 237 aaKnown RBP14.04□□□□□ -0.16
SHMT2-234ENST00000557703 ALG6Q9Y672 507 aa14.04□□□□□ -0.16
SHMT2-234ENST00000557703 CHD5Q8TDI0 1954 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 SPOPO43791 374 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 SYNCRIPO60506 623 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms