RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 ESYT3A0FGR9 886 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 CCDC151A5D8V7 595 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 GALNT2Q10471 571 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 TTC39BQ5VTQ0 682 aaPredicted RBP24.37■■□□□ 1.49
SIX4-203ENST00000556952 HTR3DQ70Z44 454 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 CASKIN2Q8WXE0 1202 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 ANKRD7Q92527 254 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 WBP2Q969T9 261 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 HDAC11Q96DB2 347 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 MUC3AQ02505 3323 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 MAPKAPK2P49137 400 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 ZP2Q05996 745 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 ZNF33AQ06730 810 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 PRKD1Q15139 912 aaPredicted RBP24.37■■□□□ 1.49
SIX4-203ENST00000556952 HEATR6Q6AI08 1181 aaKnown RBP24.37■■□□□ 1.49
SIX4-203ENST00000556952 FAM217AQ8IXS0 508 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.37■■□□□ 1.49
SIX4-203ENST00000556952 CFAP97Q9P2B7 532 aa24.37■■□□□ 1.49
SIX4-203ENST00000556952 BDP1A6H8Y1 2624 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 LEFTY2O00292 366 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 KCNN4O15554 427 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 ERLIN1O75477 346 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 IFNB1P01574 187 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 H2AFXP16104 143 aaPredicted RBP24.36■■□□□ 1.49
SIX4-203ENST00000556952 CEBPBP17676 345 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 RBL1P28749 1068 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 NDST2P52849 883 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 GDF10P55107 478 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 ALFQ53S48 1182 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 AFMIDQ63HM1 303 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 CCNI2Q6ZMN8 369 aaPredicted RBP24.36■■□□□ 1.49
SIX4-203ENST00000556952 UMODL1-AS1Q8N2C9 162 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 FAM71DQ8N9W8 422 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 HINFPQ9BQA5 517 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 FAM129AQ9BZQ8 928 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 TRIM31Q9BZY9 425 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 DPH5Q9H2P9 285 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 USP29Q9HBJ7 922 aa24.36■■□□□ 1.49
SIX4-203ENST00000556952 E2F8A0AVK6 867 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 CNTN5O94779 1100 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 TCF3P15923 654 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 GARSP41250 739 aaKnown RBP24.35■■□□□ 1.49
SIX4-203ENST00000556952 IRAK1P51617 712 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 PPIDQ08752 370 aaKnown RBP24.35■■□□□ 1.49
SIX4-203ENST00000556952 MAP9Q49MG5 647 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 RFWD3Q6PCD5 774 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 LRRC49Q8IUZ0 686 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 ARHGAP12Q8IWW6 846 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 ADHFE1Q8IWW8 467 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 SNF8Q96H20 258 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 PRICKLE1Q96MT3 831 aaPredicted RBP24.35■■□□□ 1.49
SIX4-203ENST00000556952 C10orf88Q9H8K7 445 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 TDP1Q9NUW8 608 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 WHRNQ9P202 907 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 ZNF212Q9UDV6 495 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 PRKAG3Q9UGI9 489 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 NUP205Q92621 2012 aa24.35■■□□□ 1.49
SIX4-203ENST00000556952 NYNRINQ9P2P1 1898 aaKnown RBP24.35■■□□□ 1.49
SIX4-203ENST00000556952 NDC80O14777 642 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 WEE1P30291 646 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 ACTN2P35609 894 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 RPL21P46778 160 aaKnown RBP24.34■■□□□ 1.49
SIX4-203ENST00000556952 CARSP49589 748 aaKnown RBP24.34■■□□□ 1.49
SIX4-203ENST00000556952 CDH4P55283 916 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 TRIP13Q15645 432 aaPredicted RBP24.34■■□□□ 1.49
SIX4-203ENST00000556952 P3H1Q32P28 736 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 CHST9Q7L1S5 443 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 TFAP2DQ7Z6R9 452 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 CPXM2Q8N436 756 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 BBOF1Q8ND07 529 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 SH3RF2Q8TEC5 729 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 HTR3CQ8WXA8 447 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 IFT81Q8WYA0 676 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 LGMNQ99538 433 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 SNX24Q9Y343 169 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 CHD5Q8TDI0 1954 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 SHROOM3Q8TF72 1996 aa24.34■■□□□ 1.49
SIX4-203ENST00000556952 MTSS1O43312 755 aa24.33■■□□□ 1.49
SIX4-203ENST00000556952 ADCY8P40145 1251 aa24.33■■□□□ 1.49
SIX4-203ENST00000556952 AP1B1Q10567 949 aa24.33■■□□□ 1.49
SIX4-203ENST00000556952 C4orf22Q6V702 233 aa24.33■■□□□ 1.49
SIX4-203ENST00000556952 GET4Q7L5D6 327 aaPredicted RBP24.33■■□□□ 1.49
SIX4-203ENST00000556952 CCDC33Q8N5R6 958 aa24.33■■□□□ 1.49
SIX4-203ENST00000556952 GLIS1Q8NBF1 620 aa24.33■■□□□ 1.49
SIX4-203ENST00000556952 CCNYQ8ND76 341 aa24.33■■□□□ 1.49
SIX4-203ENST00000556952 ITFG1Q8TB96 612 aa24.33■■□□□ 1.49
SIX4-203ENST00000556952 HNRNPLLQ8WVV9 542 aaKnown RBP24.33■■□□□ 1.49
SIX4-203ENST00000556952 USP13Q92995 863 aaPredicted RBP24.33■■□□□ 1.49
SIX4-203ENST00000556952 MYEOVQ96EZ4 313 aa24.33■■□□□ 1.49
SIX4-203ENST00000556952 CELF6Q96J87 481 aaKnown RBP24.33■■□□□ 1.49
SIX4-203ENST00000556952 KIF9Q9HAQ2 790 aa24.33■■□□□ 1.49
SIX4-203ENST00000556952 CD320Q9NPF0 282 aa24.33■■□□□ 1.49
SIX4-203ENST00000556952 NDFIP2Q9NV92 336 aa24.33■■□□□ 1.49
SIX4-203ENST00000556952 ZFP37Q9Y6Q3 630 aaPredicted RBP24.33■■□□□ 1.49
SIX4-203ENST00000556952 A0A1B0GVM2 712 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 TYW5A2RUC4 315 aaKnown RBP24.33■■□□□ 1.48
SIX4-203ENST00000556952 TCAF2A6NFQ2 919 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 C2CD4DB7Z1M9 353 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 GFRA2O00451 464 aa24.33■■□□□ 1.48
SIX4-203ENST00000556952 CLDN11O75508 207 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms