RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CXorf57Q6NSI4 855 aaKnown RBP9.95□□□□□ -0.82
SRP54-210ENST00000556380 CHST9Q7L1S5 443 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 FAM72BQ86X60 149 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 CIR1Q86X95 450 aaPredicted RBP9.95□□□□□ -0.82
SRP54-210ENST00000556380 MFN1Q8IWA4 741 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 CCAR2Q8N163 923 aaKnown RBP9.95□□□□□ -0.82
SRP54-210ENST00000556380 CARNMT1Q8N4J0 409 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 CAMKK1Q8N5S9 505 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 CCDC185Q8N715 623 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 ZNF513Q8N8E2 541 aaPredicted RBP9.95□□□□□ -0.82
SRP54-210ENST00000556380 ZNF557Q8N988 423 aaPredicted RBP9.95□□□□□ -0.82
SRP54-210ENST00000556380 WFIKKN2Q8TEU8 576 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 SORCS1Q8WY21 1168 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 ACDQ96AP0 544 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 ZNF653Q96CK0 615 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 ARHGEF26Q96DR7 871 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 GABRG3Q99928 467 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 FAM126AQ9BYI3 521 aaPredicted RBP9.95□□□□□ -0.82
SRP54-210ENST00000556380 ZNHIT6Q9NWK9 470 aaKnown RBP9.95□□□□□ -0.82
SRP54-210ENST00000556380 ZSCAN32Q9NX65 697 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 GGA2Q9UJY4 613 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 NEU3Q9UQ49 428 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 TBC1D30Q9Y2I9 924 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 OR51B4Q9Y5P0 310 aa9.95□□□□□ -0.82
SRP54-210ENST00000556380 FAM186AA6NE01 2351 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 CCDC163A0A0D9SF12 145 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 A0A1B0GVM2 712 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 ANKRD62A6NC57 917 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 TCAF2A6NFQ2 919 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 PROB1E7EW31 1015 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 E9PAM4 449 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 NPC1O15118 1278 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 CLDN11O75508 207 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 NTSR1P30989 418 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 CRY1Q16526 586 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 PTPRNQ16849 979 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 EOGTQ5NDL2 527 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 MBLAC2Q68D91 279 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 CYP4V2Q6ZWL3 525 aaPredicted RBP9.94□□□□□ -0.82
SRP54-210ENST00000556380 RASSF3Q86WH2 238 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 AHI1Q8N157 1196 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 OR52K2Q8NGK3 314 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 ATOH1Q92858 354 aaPredicted RBP9.94□□□□□ -0.82
SRP54-210ENST00000556380 RPRD1AQ96P16 312 aaPredicted RBP9.94□□□□□ -0.82
SRP54-210ENST00000556380 PACSIN1Q9BY11 444 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 MRPL47Q9HD33 250 aaKnown RBP9.94□□□□□ -0.82
SRP54-210ENST00000556380 FAM86C1Q9NVL1 165 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 CACNA2D2Q9NY47 1150 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 KIAA1522Q9P206 1035 aaPredicted RBP9.94□□□□□ -0.82
SRP54-210ENST00000556380 MYO1AQ9UBC5 1043 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 PPARGC1AQ9UBK2 798 aaKnown RBP9.94□□□□□ -0.82
SRP54-210ENST00000556380 OR12D3Q9UGF7 316 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 EBF1Q9UH73 591 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 SLC8A2Q9UPR5 921 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 PCDHGA2Q9Y5H1 932 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 STON1Q9Y6Q2 735 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 SCINQ9Y6U3 715 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 USP34Q70CQ2 3546 aa9.94□□□□□ -0.82
SRP54-210ENST00000556380 TYW5A2RUC4 315 aaKnown RBP9.93□□□□□ -0.82
SRP54-210ENST00000556380 WASH3PC4AMC7 463 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 H0Y626 953 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 AKR1B10O60218 316 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 LRCH4O75427 683 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 APBB3O95704 486 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 DLDP09622 509 aaKnown RBP9.93□□□□□ -0.82
SRP54-210ENST00000556380 PSMA2P25787 234 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 MZF1P28698 734 aaPredicted RBP9.93□□□□□ -0.82
SRP54-210ENST00000556380 L1CAMP32004 1257 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 CSKP41240 450 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 IL12RB1P42701 662 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 WASP42768 502 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 PXNP49023 591 aaPredicted RBP9.93□□□□□ -0.82
SRP54-210ENST00000556380 FNTBP49356 437 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 DGKEP52429 567 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 NRLP54845 237 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 CDH4P55283 916 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 SEMA3BQ13214 749 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 SLC12A1Q13621 1099 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 CDH18Q13634 790 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 ZNF234Q14588 700 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 PLEKHG6Q3KR16 790 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 ARL13BQ3SXY8 428 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 PITRM1Q5JRX3 1037 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 KIAA1211LQ6NV74 962 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 LRRC31Q6UY01 552 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 TRMT11Q7Z4G4 463 aaKnown RBP9.93□□□□□ -0.82
SRP54-210ENST00000556380 SLFN11Q7Z7L1 901 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 WDR5BQ86VZ2 330 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 NLRP14Q86W24 1093 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 LONP2Q86WA8 852 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 APCDD1Q8J025 514 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 NIPA2Q8N8Q9 360 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 UCMAQ8WVF2 138 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 ZNF775Q96BV0 537 aaPredicted RBP9.93□□□□□ -0.82
SRP54-210ENST00000556380 MYO19Q96H55 970 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 MRGPRX3Q96LB0 322 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 CCDC42Q96M95 316 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 HHIPQ96QV1 700 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 PANX2Q96RD6 677 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 PEBP4Q96S96 227 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms