RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 RHPN2Q8IUC4 686 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 KRTAP1-3Q8IUG1 177 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 ARMC8Q8IUR7 673 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 ZNF366Q8N895 744 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 EXD3Q8N9H8 876 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 RFWD2Q8NHY2 731 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 ZNF398Q8TD17 642 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 PIGKQ92643 395 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 ZUFSPQ96AP4 578 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 APOPT1Q96IL0 206 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 ADAD1Q96M93 576 aaKnown RBP5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 FCRL5Q96RD9 977 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 PHF7Q9BWX1 381 aaPredicted RBP5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 NPLQ9BXD5 320 aaPredicted RBP5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 CTDSP1Q9GZU7 261 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 PCED1AQ9H1Q7 454 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 MROH8Q9H579 483 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 TXNRD2Q9NNW7 524 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 TLR8Q9NR97 1041 aaKnown RBP5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 ING1Q9UK53 422 aaPredicted RBP5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 DTX4Q9Y2E6 619 aa5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 FNDC1Q4ZHG4 1894 aaPredicted RBP5.92□□□□□ -1.46
CKS1BP1-201ENST00000555221 GOLGA6L10A0A0M3HER8 536 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 TMEM247A6NEH6 219 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 FAM90A7PA6NKC0 464 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 FAM90A22PA8MWA6 464 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 FAM90A12PA8MX19 464 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 FAM90A23PA8MXZ1 464 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 RRHO14718 337 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 TSPAN4O14817 238 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 FSHBP01225 129 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 HLA-DQA2P01906 255 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 STAT1P42224 750 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 CASP2P42575 452 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 PAFAH1B1P43034 410 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 SOX2P48431 317 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 TGFB2P61812 414 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 MTA1Q13330 715 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 BYSLQ13895 437 aaKnown RBP5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 HYIQ5T013 277 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 C10orf76Q5T2E6 689 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 STRIP1Q5VSL9 837 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 AADACL2Q6P093 401 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 ZNF813Q6ZN06 617 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 ADGRG6Q86SQ4 1221 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 KLBQ86Z14 1044 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 PAQR4Q8N4S7 273 aaPredicted RBP5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 TBC1D22AQ8WUA7 517 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 ZNF347Q96SE7 839 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 INTS2Q9H0H0 1204 aaKnown RBP5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 TTC12Q9H892 705 aaPredicted RBP5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 IL21RQ9HBE5 538 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 BEX4Q9NWD9 120 aaPredicted RBP5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 PPP1R14DQ9NXH3 145 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 ARL15Q9NXU5 204 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 SLC8A2Q9UPR5 921 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 OSGIN2Q9Y236 505 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 TNFSF13BQ9Y275 285 aa5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 WDR33Q9C0J8 1336 aaKnown RBP5.91□□□□□ -1.46
CKS1BP1-201ENST00000555221 INPPL1O15357 1258 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 HBP1O60381 514 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 C1QL1O75973 258 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 BAIAP3O94812 1187 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 TBX18O95935 607 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 PLAUP00749 431 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 IGLV2-14P01704 120 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 NHLRC4P0CG21 123 aaPredicted RBP5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 RPS6KB1P23443 525 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 ABCD3P28288 659 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 HNF1BP35680 557 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 GJC1P36383 396 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 RXRGP48443 463 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 CLK3P49761 638 aaKnown RBP5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 HSF1Q00613 529 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 NAA25Q14CX7 972 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 FAM180BQ6P0A1 224 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 SLC30A9Q6PML9 568 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 TNIP2Q8NFZ5 429 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 FAM110DQ8TAY7 271 aaPredicted RBP5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 C2CD4CQ8TF44 421 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 NELL1Q92832 810 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 ZBTB10Q96DT7 871 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 C7orf26Q96N11 449 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 EFHD1Q9BUP0 239 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 TM2D2Q9BX73 214 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 CADM1Q9BY67 442 aaKnown RBP5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 TMEM248Q9NWD8 314 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 ZNHIT2Q9UHR6 403 aa5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 IPO11Q9UI26 975 aaKnown RBP5.9□□□□□ -1.46
CKS1BP1-201ENST00000555221 AOX1Q06278 1338 aa5.9□□□□□ -1.47
CKS1BP1-201ENST00000555221 GAGE10A6NGK3 116 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 KCNJ18B7U540 433 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 TNPO2O14787 897 aaKnown RBP5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 STRNO43815 780 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 CD63P08962 238 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 ST6GAL1P15907 406 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 TFEBP19484 476 aa5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 CCT4P50991 539 aaKnown RBP5.89□□□□□ -1.47
CKS1BP1-201ENST00000555221 SLC12A2P55011 1212 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms