RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 CLEC4CQ8WTT0 213 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 STK32AQ8WU08 396 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 ZNF606Q8WXB4 792 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 WBP1Q96G27 269 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 SLC6A18Q96N87 628 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 RSPH9Q9H1X1 276 aaPredicted RBP12.24□□□□□ -0.45
SRP54-203ENST00000553544 PABPC3Q9H361 631 aaKnown RBP12.24□□□□□ -0.45
SRP54-203ENST00000553544 SIX2Q9NPC8 291 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 APEX2Q9UBZ4 518 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 SFMBT1Q9UHJ3 866 aa12.24□□□□□ -0.45
SRP54-203ENST00000553544 HBS1LQ9Y450 684 aaKnown RBP12.24□□□□□ -0.45
SRP54-203ENST00000553544 TLR4O00206 839 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 BRINP1O60477 761 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 FBXO21O94952 628 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 WNT1P04628 370 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 FYNP06241 537 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 KRT5P13647 590 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 GLDCP23378 1020 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 MTIF2P46199 727 aaKnown RBP12.23□□□□□ -0.45
SRP54-203ENST00000553544 RXRGP48443 463 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 ST8SIA6P61647 398 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 TLE3Q04726 772 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 SLC45A4Q5BKX6 768 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 MIIPQ5JXC2 388 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 DENND1BQ6P3S1 775 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 NCEH1Q6PIU2 408 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 FMNL3Q8IVF7 1028 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.23□□□□□ -0.45
SRP54-203ENST00000553544 OR2T34Q8NGX1 318 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 GPT2Q8TD30 523 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 RNF139Q8WU17 664 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 SHC3Q92529 594 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 EDEM1Q92611 657 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 OMDQ99983 421 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 SLC4A5Q9BY07 1137 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 NEUROG2Q9H2A3 272 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 ERVMER34-1Q9H9K5 563 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 ACP6Q9NPH0 428 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 DACH1Q9UI36 760 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 STOML2Q9UJZ1 356 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 TPX2Q9ULW0 747 aaKnown RBP12.23□□□□□ -0.45
SRP54-203ENST00000553544 CLCA2Q9UQC9 943 aa12.23□□□□□ -0.45
SRP54-203ENST00000553544 NYNRINQ9P2P1 1898 aaKnown RBP12.23□□□□□ -0.45
SRP54-203ENST00000553544 CKAP5Q14008 2032 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 PIK3R2O00459 728 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 MED7O43513 233 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 LETM1O95202 739 aaPredicted RBP12.22□□□□□ -0.45
SRP54-203ENST00000553544 LATS1O95835 1130 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 MBD3O95983 291 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 IGLV3-27P01718 113 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 LTFP02788 710 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 PTMSP20962 102 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 CCR5P51681 352 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 E2F1Q01094 437 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 RHDQ02161 417 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 BNIP3Q12983 259 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 TPD52L1Q16890 204 aaPredicted RBP12.22□□□□□ -0.45
SRP54-203ENST00000553544 TBC1D25Q3MII6 688 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 VWA3BQ502W6 1294 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 MPP7Q5T2T1 576 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 BROXQ5VW32 411 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 BEND5Q7L4P6 421 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 TMEM110Q86TL2 294 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 FAM114A1Q8IWE2 563 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 SPACA3Q8IXA5 215 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 OXR1Q8N573 874 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 ZNF557Q8N988 423 aaPredicted RBP12.22□□□□□ -0.45
SRP54-203ENST00000553544 SERAC1Q96JX3 654 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 TUBGCP2Q9BSJ2 902 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 IRX2Q9BZI1 471 aaPredicted RBP12.22□□□□□ -0.45
SRP54-203ENST00000553544 NDST4Q9H3R1 872 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 EBF2Q9HAK2 575 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 CYTH4Q9UIA0 394 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 AJAP1Q9UKB5 411 aaPredicted RBP12.22□□□□□ -0.45
SRP54-203ENST00000553544 ATMQ13315 3056 aa12.22□□□□□ -0.45
SRP54-203ENST00000553544 A0A1W2PP55 124 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 A0A1W2PR77 199 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 RNASEH2AO75792 299 aaKnown RBP12.21□□□□□ -0.45
SRP54-203ENST00000553544 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.45
SRP54-203ENST00000553544 EPHA8P29322 1005 aaPredicted RBP12.21□□□□□ -0.45
SRP54-203ENST00000553544 GNA15P30679 374 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 SLC8A1P32418 973 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 ACADSBP45954 432 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 UCNP55089 124 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 KCNMA1Q12791 1236 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 KCNJ12Q14500 433 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 CST6Q15828 149 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 ARHGAP44Q17R89 818 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 PCSK4Q6UW60 755 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 WDTC1Q8N5D0 677 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 DCBLD1Q8N8Z6 715 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 ZNF248Q8NDW4 579 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 RFFLQ8WZ73 363 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 TTC17Q96AE7 1141 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 LGMNQ99538 433 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 MIS12Q9H081 205 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 MTG2Q9H4K7 406 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 SAMSN1Q9NSI8 373 aaKnown RBP12.21□□□□□ -0.45
SRP54-203ENST00000553544 ADAMTS1Q9UHI8 967 aa12.21□□□□□ -0.45
SRP54-203ENST00000553544 FZD4Q9ULV1 537 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms