RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 DDIT4Q9NX09 232 aa21.02■□□□□ 0.96
SSH1-207ENST00000547862 CNTN6Q9UQ52 1028 aa21.02■□□□□ 0.96
SSH1-207ENST00000547862 RAXQ9Y2V3 346 aa21.02■□□□□ 0.96
SSH1-207ENST00000547862 NBEAQ8NFP9 2946 aa21.02■□□□□ 0.96
SSH1-207ENST00000547862 CBX4O00257 560 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 ADH1BP00325 375 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 METAP1P53582 386 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 MARSP56192 900 aaKnown RBP21.01■□□□□ 0.95
SSH1-207ENST00000547862 PPP2CBP62714 309 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 PPP2CAP67775 309 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 KCNJ12Q14500 433 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 COL28A1Q2UY09 1125 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 TRIM65Q6PJ69 517 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 DHRS13Q6UX07 377 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 SND1Q7KZF4 910 aaKnown RBP eCLIP21.01■□□□□ 0.95
SSH1-207ENST00000547862 DEFB106AQ8N104 65 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 MED15Q96RN5 788 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 THAP9Q9H5L6 903 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 SLC12A6Q9UHW9 1150 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 FZD4Q9ULV1 537 aa21.01■□□□□ 0.95
SSH1-207ENST00000547862 COL5A1P20908 1838 aaPredicted RBP21.01■□□□□ 0.95
SSH1-207ENST00000547862 A0A1B0GTQ1 180 aa21■□□□□ 0.95
SSH1-207ENST00000547862 FAM170AA1A519 330 aa21■□□□□ 0.95
SSH1-207ENST00000547862 BECN2A8MW95 431 aa21■□□□□ 0.95
SSH1-207ENST00000547862 KCNU1A8MYU2 1149 aa21■□□□□ 0.95
SSH1-207ENST00000547862 WNT9AO14904 365 aa21■□□□□ 0.95
SSH1-207ENST00000547862 VILLO15195 856 aa21■□□□□ 0.95
SSH1-207ENST00000547862 BNIP3LO60238 219 aa21■□□□□ 0.95
SSH1-207ENST00000547862 PCDHGA12O60330 932 aa21■□□□□ 0.95
SSH1-207ENST00000547862 IGLV3-25P01717 112 aa21■□□□□ 0.95
SSH1-207ENST00000547862 ABCB4P21439 1286 aa21■□□□□ 0.95
SSH1-207ENST00000547862 NNMTP40261 264 aa21■□□□□ 0.95
SSH1-207ENST00000547862 IRAK1P51617 712 aa21■□□□□ 0.95
SSH1-207ENST00000547862 CLDN6P56747 220 aa21■□□□□ 0.95
SSH1-207ENST00000547862 CDK17Q00537 523 aa21■□□□□ 0.95
SSH1-207ENST00000547862 NME3Q13232 169 aa21■□□□□ 0.95
SSH1-207ENST00000547862 ACCSLQ4AC99 568 aa21■□□□□ 0.95
SSH1-207ENST00000547862 RABGAP1LQ5R372 815 aa21■□□□□ 0.95
SSH1-207ENST00000547862 FOXR2Q6PJQ5 311 aa21■□□□□ 0.95
SSH1-207ENST00000547862 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21■□□□□ 0.95
SSH1-207ENST00000547862 ELOA2Q8IYF1 753 aaPredicted RBP21■□□□□ 0.95
SSH1-207ENST00000547862 GALNT15Q8N3T1 639 aa21■□□□□ 0.95
SSH1-207ENST00000547862 KDM1BQ8NB78 822 aa21■□□□□ 0.95
SSH1-207ENST00000547862 PTPRN2Q92932 1015 aa21■□□□□ 0.95
SSH1-207ENST00000547862 SKA1Q96BD8 255 aa21■□□□□ 0.95
SSH1-207ENST00000547862 SERAC1Q96JX3 654 aa21■□□□□ 0.95
SSH1-207ENST00000547862 RPRD1AQ96P16 312 aaPredicted RBP21■□□□□ 0.95
SSH1-207ENST00000547862 CPXM1Q96SM3 734 aa21■□□□□ 0.95
SSH1-207ENST00000547862 FAM129BQ96TA1 746 aa21■□□□□ 0.95
SSH1-207ENST00000547862 ADAMTS1Q9UHI8 967 aa21■□□□□ 0.95
SSH1-207ENST00000547862 GPSM3Q9Y4H4 160 aa21■□□□□ 0.95
SSH1-207ENST00000547862 ITPR1Q14643 2758 aa21■□□□□ 0.95
SSH1-207ENST00000547862 A0A1B0GVM2 712 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 TCAF2A6NFQ2 919 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 FGFR1OPO95684 399 aaKnown RBP20.99■□□□□ 0.95
SSH1-207ENST00000547862 GOT1P17174 413 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 SLC9A1P19634 815 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 C5AR1P21730 350 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 CD38P28907 300 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 MAT2AP31153 395 aaKnown RBP20.99■□□□□ 0.95
SSH1-207ENST00000547862 ELAVL3Q14576 367 aaKnown RBP20.99■□□□□ 0.95
SSH1-207ENST00000547862 ARID5BQ14865 1188 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 FAM183BPQ6ZVS7 135 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 BEND5Q7L4P6 421 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 TMEM110Q86TL2 294 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 C1orf131Q8NDD1 294 aaKnown RBP20.99■□□□□ 0.95
SSH1-207ENST00000547862 STK32AQ8WU08 396 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 HNRNPLLQ8WVV9 542 aaKnown RBP20.99■□□□□ 0.95
SSH1-207ENST00000547862 ELF4Q99607 663 aaPredicted RBP20.99■□□□□ 0.95
SSH1-207ENST00000547862 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.99■□□□□ 0.95
SSH1-207ENST00000547862 SLC25A13Q9UJS0 675 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 VANGL2Q9ULK5 521 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 APC2O95996 2303 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 ACACAQ13085 2346 aa20.99■□□□□ 0.95
SSH1-207ENST00000547862 TBC1D3DA0A087WVF3 549 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 TBC1D3IA0A087WXS9 549 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 TBC1D3EA0A087X179 549 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 TBC1D3KA0A087X1G2 549 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 TBC1D3FA6NER0 549 aaPredicted RBP20.98■□□□□ 0.95
SSH1-207ENST00000547862 TBC1D3LB9A6J9 549 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 DKK1O94907 266 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 ITGAVP06756 1048 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 TBC1D3HP0C7X1 549 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 MEA1Q16626 185 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 TTC39BQ5VTQ0 682 aaPredicted RBP20.98■□□□□ 0.95
SSH1-207ENST00000547862 TBC1D3GQ6DHY5 549 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 OR6B2Q6IFH4 312 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 TBC1D3CQ6IPX1 549 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 CXorf57Q6NSI4 855 aaKnown RBP20.98■□□□□ 0.95
SSH1-207ENST00000547862 ENOSF1Q7L5Y1 443 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 TBC1D3Q8IZP1 549 aaPredicted RBP20.98■□□□□ 0.95
SSH1-207ENST00000547862 PPP1R13BQ96KQ4 1090 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 PRMT1Q99873 361 aaKnown RBP20.98■□□□□ 0.95
SSH1-207ENST00000547862 GDF3Q9NR23 364 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 MYLKQ15746 1914 aa20.98■□□□□ 0.95
SSH1-207ENST00000547862 ENC1O14682 589 aa20.97■□□□□ 0.95
SSH1-207ENST00000547862 RTN2O75298 545 aa20.97■□□□□ 0.95
SSH1-207ENST00000547862 PNMA6AP0CW24 399 aaPredicted RBP20.97■□□□□ 0.95
SSH1-207ENST00000547862 CCR1P32246 355 aa20.97■□□□□ 0.95
SSH1-207ENST00000547862 DRD3P35462 400 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms