RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 UBXN1Q04323 297 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 SULT2A1Q06520 285 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 ZNF177Q13360 481 aaPredicted RBP16.91■□□□□ 0.3
CCND1-205ENST00000542367 TTC31Q49AM3 519 aaPredicted RBP16.91■□□□□ 0.3
CCND1-205ENST00000542367 BRMS1LQ5PSV4 323 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 ZCCHC9Q8N567 271 aaKnown RBP16.91■□□□□ 0.3
CCND1-205ENST00000542367 MINDY1Q8N5J2 469 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 NEK11Q8NG66 645 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 OR52K2Q8NGK3 314 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 OR2I1PQ8NGU4 316 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 PCED1AQ9H1Q7 454 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 HSD3B7Q9H2F3 369 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 TMEM59LQ9UK28 342 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 DAAM1Q9Y4D1 1078 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 SNX10Q9Y5X0 201 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 PCDH15Q96QU1 1955 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 ITIH6Q6UXX5 1313 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 EDDM13A0A1B0GTR0 161 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 I6L893 689 aaPredicted RBP16.9■□□□□ 0.3
CCND1-205ENST00000542367 OPHN1O60890 802 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 RNASEH1O60930 286 aaKnown RBP16.9■□□□□ 0.3
CCND1-205ENST00000542367 CLDN11O75508 207 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 SEMA4FO95754 770 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 CYP1A1P04798 512 aaPredicted RBP16.9■□□□□ 0.3
CCND1-205ENST00000542367 CEACAM1P13688 526 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 NNMTP40261 264 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 TYRO3Q06418 890 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 C5orf22Q49AR2 442 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 TRNP1Q6NT89 227 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 APTXQ7Z2E3 356 aaKnown RBP16.9■□□□□ 0.3
CCND1-205ENST00000542367 MMAAQ8IVH4 418 aaKnown RBP16.9■□□□□ 0.3
CCND1-205ENST00000542367 HDDC3Q8N4P3 179 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 DEFB124Q8NES8 71 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 SLC30A5Q8TAD4 765 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 GANCQ8TET4 914 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 SNX19Q92543 992 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 PTPRN2Q92932 1015 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 ALG14Q96F25 216 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 CFAP57Q96MR6 1250 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 PPP1R9BQ96SB3 815 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 FEM1AQ9BSK4 669 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 PABPC3Q9H361 631 aaKnown RBP16.9■□□□□ 0.3
CCND1-205ENST00000542367 SGK2Q9HBY8 427 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 TMPRSS4Q9NRS4 437 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 FBXL12Q9NXK8 326 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 SCML1Q9UN30 329 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 NCKAP1Q9Y2A7 1128 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 PAXBP1Q9Y5B6 917 aa16.9■□□□□ 0.3
CCND1-205ENST00000542367 BCAT2O15382 392 aaPredicted RBP16.89■□□□□ 0.29
CCND1-205ENST00000542367 CNTN5O94779 1100 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 MMP8P22894 467 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 CDH4P55283 916 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 SEMA3BQ13214 749 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 CST6Q15828 149 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 ARCQ7LC44 396 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 PHLDB2Q86SQ0 1253 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 STK40Q8N2I9 435 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 AOPEPQ8N6M6 819 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 C1orf74Q96LT6 269 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 ERGIC2Q96RQ1 377 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 FAM129BQ96TA1 746 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 METTL5Q9NRN9 209 aaKnown RBP16.89■□□□□ 0.29
CCND1-205ENST00000542367 TMEM51Q9NW97 253 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 TBC1D30Q9Y2I9 924 aa16.89■□□□□ 0.29
CCND1-205ENST00000542367 MID1O15344 667 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 ATP1A3P13637 1013 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 VAV1P15498 845 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 PMLP29590 882 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 SLC8A1P32418 973 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 SFSWAPQ12872 951 aaKnown RBP16.88■□□□□ 0.29
CCND1-205ENST00000542367 GRIK2Q13002 908 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 ANO6Q4KMQ2 910 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 ALFQ53S48 1182 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 LRRC31Q6UY01 552 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 TRIM72Q6ZMU5 477 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 USP30Q70CQ3 517 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 BNIPLQ7Z465 357 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 ZNF683Q8IZ20 524 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 EMC1Q8N766 993 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 C1orf216Q8TAB5 229 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 BIRC7Q96CA5 298 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 CNTNAP3BQ96NU0 1288 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 PCDHB18PQ96TA0 734 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 C11orf70Q9BRQ4 267 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 CNTNAP3Q9BZ76 1288 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 ZDHHC5Q9C0B5 715 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 NAT10Q9H0A0 1025 aaKnown RBP16.88■□□□□ 0.29
CCND1-205ENST00000542367 NEUROG2Q9H2A3 272 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 SLC32A1Q9H598 525 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 DNAAF2Q9NVR5 837 aaKnown RBP16.88■□□□□ 0.29
CCND1-205ENST00000542367 SERGEFQ9UGK8 458 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 SLC25A13Q9UJS0 675 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 VPS28Q9UK41 221 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.88■□□□□ 0.29
CCND1-205ENST00000542367 OR51B4Q9Y5P0 310 aa16.88■□□□□ 0.29
CCND1-205ENST00000542367 A0A1W2PP55 124 aa16.87■□□□□ 0.29
CCND1-205ENST00000542367 FAM47DPA6NHR8 397 aa16.87■□□□□ 0.29
CCND1-205ENST00000542367 DRGXA6NNA5 263 aa16.87■□□□□ 0.29
CCND1-205ENST00000542367 RNASEH2AO75792 299 aaKnown RBP16.87■□□□□ 0.29
CCND1-205ENST00000542367 FSBPO95073 299 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms