RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ATP6V1E2Q96A05 226 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 ANKRD60Q9BZ19 345 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 PCNTO95613 3336 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 G3V2L1 256 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 NEMP1O14524 444 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 TRIM13O60858 407 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 AMHP03971 560 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 NELFEP18615 380 aaKnown RBP18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 PGAM1P18669 254 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 GP5P40197 560 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 MAGEA12P43365 314 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 CRADDP78560 199 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 BTG3Q14201 252 aaPredicted RBP18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 STYK1Q6J9G0 422 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 CLVS1Q8IUQ0 354 aaPredicted RBP18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 FIBCD1Q8N539 461 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 BORCS5Q969J3 196 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 ISL2Q96A47 359 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 ASB9Q96DX5 294 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 SEMA6AQ9H2E6 1030 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 TMEM134Q9H6X4 195 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 JPH1Q9HDC5 661 aaPredicted RBP18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 GPATCH2LQ9NWQ4 482 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 TUBA8Q9NY65 449 aaPredicted RBP18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 MORF4L1Q9UBU8 362 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 NXF1Q9UBU9 619 aaKnown RBP18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 EBF1Q9UH73 591 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 TRIM38O00635 465 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 VAPBO95292 243 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 ZNF12P17014 697 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 ARL2P36404 184 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 GMPRP36959 345 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 HK2P52789 917 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 SP4Q02446 784 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 ANKDD1AQ495B1 522 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 ZBED5Q49AG3 693 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 SEL1L3Q68CR1 1132 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 ZNF670Q9BS34 389 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 ITGB1BP2Q9UKP3 347 aa18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.98■□□□□ 0.63
SFSWAP-207ENST00000538548 FAM155AB1AL88 458 aaPredicted RBP18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 TCP10L2B9ZVM9 353 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 TOMM70O94826 608 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 RAP1GAPP47736 663 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 TFAMQ00059 246 aaKnown RBP18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 TGFBIQ15582 683 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 CMC1Q7Z7K0 106 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 VSIG10LQ86VR7 867 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 CNTD1Q8N815 330 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 C12orf43Q96C57 262 aaKnown RBP18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 ZNF341Q9BYN7 854 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 HIPK3Q9H422 1215 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 E2F8A0AVK6 867 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 MICAL2O94851 1124 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 P4HA1P13674 534 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 SLC5A3P53794 718 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 PTK2BQ14289 1009 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 SURF1Q15526 300 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 ZNF829Q3KNS6 432 aaPredicted RBP18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 MAMDC4Q6UXC1 1216 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 ZPBP2Q6X784 338 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 MYO1HQ8N1T3 1032 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 PLD6Q8N2A8 252 aaKnown RBP18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 STON2Q8WXE9 905 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 TBCBQ99426 244 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 SLX1AQ9BQ83 275 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 NAT9Q9BTE0 207 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 SLC38A10Q9HBR0 1119 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 ZBTB26Q9HCK0 441 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 IPO11Q9UI26 975 aaKnown RBP18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 ADAM28Q9UKQ2 775 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 CLEC11AQ9Y240 323 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 RAP2CQ9Y3L5 183 aa18.97■□□□□ 0.63
SFSWAP-207ENST00000538548 A0A087WXM4 84 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 TRIM64CA6NLI5 447 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 M0QYV0 167 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 TCN1P20061 433 aaPredicted RBP18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 FUT4P22083 530 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 CCND2P30279 289 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 GPD2P43304 727 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 RPL14P50914 215 aaKnown RBP18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 ACTR2P61160 394 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 KCTD21Q4G0X4 260 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 GRTP1Q5TC63 336 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 SCYL2Q6P3W7 929 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 ABHD15Q6UXT9 468 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 CPNE1Q99829 537 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 TRIM43BA6NCK2 446 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 MPSTP25325 297 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 PSMD7P51665 324 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 CCR3P51677 355 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 PTPN11Q06124 597 aaPredicted RBP18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 ORC1Q13415 861 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 ZBTB33Q86T24 672 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 ZSCAN18Q8TBC5 510 aaPredicted RBP18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 ARNTL2Q8WYA1 636 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 LRTOMTQ8WZ04 291 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 TOP1MTQ969P6 601 aa18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 TMA16Q96EY4 203 aaKnown RBP18.96■□□□□ 0.63
SFSWAP-207ENST00000538548 TCHPQ9BT92 498 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms