RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 SAE1Q9UBE0 346 aaPredicted RBP2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CACNG4Q9UBN1 327 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LRWD1Q9UFC0 647 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FBXO10Q9UK96 956 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RCOR1Q9UKL0 485 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZNF215Q9UL58 517 aaPredicted RBP2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 DNM3Q9UQ16 869 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SIK3Q9Y2K2 1263 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 HES2Q9Y543 173 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GPR45Q9Y5Y3 372 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GPR179Q6PRD1 2367 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FREM2Q5SZK8 3169 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CELSR3Q9NYQ7 3312 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PIEZO1Q92508 2521 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PTPRSQ13332 1948 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 WDR81Q562E7 1941 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MUC6Q6W4X9 2439 aa2.76□□□□□ -1.97
TNFRSF1A-210ENST00000537842 COL1A2P08123 1366 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZFHX2Q9C0A1 2572 aaPredicted RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MYH9P35579 1960 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 A0A0U1RQF3 1178 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LINC01553A4QN01 128 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 NPEPPSL1A6NEC2 478 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 C9orf118A6NHY6 69 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MYMKA6NI61 221 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TISP43B9A030 160 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 H3BQV1 296 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 HNRNPDLO14979 420 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GRM6O15303 877 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MAGEB2O15479 319 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FAM189A1O60320 539 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TSPAN1O60635 241 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 USO1O60763 962 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RPS6KA5O75582 802 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 DDHD2O94830 711 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RHOBTB3O94955 611 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CSTBP04080 98 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PLA2G4BP0C869 781 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 DHRS4L1P0CG22 281 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 XRCC6P12956 609 aaKnown RBP eCLIP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 OSMP13725 252 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ARF4P18085 180 aaPredicted RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PDCP20941 246 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 C5AR1P21730 350 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SP100P23497 879 aaPredicted RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ADSSP30520 456 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RFC2P35250 354 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PPM1AP35813 382 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CCT6AP40227 531 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PRPHP41219 470 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 NPTX2P47972 431 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RXRGP48443 463 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MANFP55145 182 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LGALS4P56470 323 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 BCAR1P56945 870 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RAC3P60763 192 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CDK17Q00537 523 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PLIN5Q00G26 463 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SRSF2Q01130 221 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PLP2Q04941 152 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MGAT5Q09328 741 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TOP3AQ13472 1001 aaPredicted RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TRIM29Q14134 588 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GIT2Q14161 759 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 EMC2Q15006 297 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZRSR1Q15695 479 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 NAB2Q15742 525 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 UGT8Q16880 541 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RNF151Q2KHN1 245 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TTC31Q49AM3 519 aaPredicted RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ANO6Q4KMQ2 910 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 EPC2Q52LR7 807 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RILPL1Q5EBL4 403 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 XKR9Q5GH70 373 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZMAT1Q5H9K5 638 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TOR2AQ5JU69 321 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 AGBL4Q5VU57 503 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 KIAA1841Q6NSI8 718 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SLC39A4Q6P5W5 647 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PSRC1Q6PGN9 363 aaPredicted RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LVRNQ6Q4G3 990 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GLB1LQ6UWU2 654 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CYP26C1Q6V0L0 522 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 USP45Q70EL2 814 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TAS1R1Q7RTX1 841 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FRMD5Q7Z6J6 570 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MRPL10Q7Z7H8 261 aaKnown RBP2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ECHDC2Q86YB7 292 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZNF280BQ86YH2 543 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 REXO1L1PQ8IX06 675 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 OR2C3Q8N628 320 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RNF149Q8NC42 400 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ZBTB34Q8NCN2 500 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TMEM161BQ8NDZ6 487 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 VN1R2Q8NFZ6 395 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PHOSPHO2Q8TCD6 241 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ARNTL2Q8WYA1 636 aa2.75□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RUBCNQ92622 972 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms