RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 RASSF3Q86WH2 238 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 PTRH1Q86Y79 214 aaKnown RBP4.32□□□□□ -1.72
YBX3-205ENST00000536107 TICAM1Q8IUC6 712 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 TRIML1Q8N9V2 468 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 LEMD2Q8NC56 503 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 CLEC18CQ8NCF0 446 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 BPIFB1Q8TDL5 484 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 SH3RF2Q8TEC5 729 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 SCARB1Q8WTV0 552 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 ZNF578Q96N58 590 aaPredicted RBP4.32□□□□□ -1.72
YBX3-205ENST00000536107 DPH1Q9BZG8 443 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 CD244Q9BZW8 370 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 EBF3Q9H4W6 596 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 GKN1Q9NS71 199 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 TPCN1Q9ULQ1 816 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 BTBD3Q9Y2F9 522 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 LRBAP50851 2863 aa4.32□□□□□ -1.72
YBX3-205ENST00000536107 PCNX1Q96RV3 2341 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 A0A087WZ62 844 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 FAM90A27PA6NNH2 459 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 GOLGA6L6A8MZA4 724 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 K7ENP7 123 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 IKBKBO14920 756 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 MAFGO15525 162 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 ORC4O43929 436 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 NDUFS2O75306 463 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 DCTP40126 519 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 GRK6P43250 576 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 MCM2P49736 904 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 CDC42EP1Q00587 391 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 CYP4A11Q02928 519 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 DSC1Q08554 894 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 TWF1Q12792 350 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 ELAVL2Q12926 359 aaKnown RBP4.31□□□□□ -1.72
YBX3-205ENST00000536107 SF3A1Q15459 793 aaKnown RBP4.31□□□□□ -1.72
YBX3-205ENST00000536107 CRY1Q16526 586 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 HLA-BQ31612 363 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 INAVAQ3KP66 663 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 ZSCAN23Q3MJ62 389 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 ARHGAP15Q53QZ3 475 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 WDR45BQ5MNZ6 344 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 INO80CQ6PI98 192 aaPredicted RBP4.31□□□□□ -1.72
YBX3-205ENST00000536107 USP17L6PQ6QN14 398 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 MRPL10Q7Z7H8 261 aaKnown RBP4.31□□□□□ -1.72
YBX3-205ENST00000536107 HACE1Q8IYU2 909 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 NLGN4XQ8N0W4 816 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 CNNM3Q8NE01 707 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 OLIG1Q8TAK6 271 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 PIBF1Q8WXW3 757 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 CD101Q93033 1021 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 LRRC3BQ96PB8 259 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 MNTQ99583 582 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 FDXACB1Q9BRP7 624 aaPredicted RBP4.31□□□□□ -1.72
YBX3-205ENST00000536107 TRIM6Q9C030 488 aaPredicted RBP4.31□□□□□ -1.72
YBX3-205ENST00000536107 ITPR2Q14571 2701 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 KAT6AQ92794 2004 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 ABCA2Q9BZC7 2435 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 NAV3Q8IVL0 2385 aa4.31□□□□□ -1.72
YBX3-205ENST00000536107 MUC22E2RYF6 1773 aaPredicted RBP4.3□□□□□ -1.72
YBX3-205ENST00000536107 PHLPP2Q6ZVD8 1323 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 ARHGEF17Q96PE2 2063 aaPredicted RBP4.3□□□□□ -1.72
YBX3-205ENST00000536107 A0A087X0B3 334 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 A0A1B0GTW7 788 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 TCRBV21S2A2A0A5A6 115 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 ARHGEF37A1IGU5 675 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 CASTOR2A6NHX0 329 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 MEI4A8MW99 385 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 KLRF2D3W0D1 207 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 IPO5O00410 1097 aaKnown RBP4.3□□□□□ -1.72
YBX3-205ENST00000536107 SUSD5O60279 629 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 MOSPD3O75425 235 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 RFPL3O75679 317 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 PRKCBP05771 671 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 ZFYP08048 801 aaPredicted RBP4.3□□□□□ -1.72
YBX3-205ENST00000536107 ZNF883P0CG24 379 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 AOAHP28039 575 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 DNM2P50570 870 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 ADCY7P51828 1080 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 STXBP5Q5T5C0 1151 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 GPR158Q5T848 1215 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 FHL5Q5TD97 284 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 NAIF1Q69YI7 327 aaPredicted RBP4.3□□□□□ -1.72
YBX3-205ENST00000536107 GRAMD4Q6IC98 578 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 FAM111BQ6SJ93 734 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 Q6YL49 198 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 USP53Q70EK8 1073 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 RHPN2Q8IUC4 686 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 CCDC60Q8IWA6 550 aaPredicted RBP4.3□□□□□ -1.72
YBX3-205ENST00000536107 ZCCHC9Q8N567 271 aaKnown RBP4.3□□□□□ -1.72
YBX3-205ENST00000536107 ZNF461Q8TAF7 563 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 CPLX3Q8WVH0 158 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 SNRNP27Q8WVK2 155 aaKnown RBP4.3□□□□□ -1.72
YBX3-205ENST00000536107 C16orf92Q96LL3 132 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 FAM20AQ96MK3 541 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 NLRP4Q96MN2 994 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 PIGSQ96S52 555 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 BACH2Q9BYV9 841 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 EPN3Q9H201 632 aa4.3□□□□□ -1.72
YBX3-205ENST00000536107 PRKRIP1Q9H875 184 aaPredicted RBP4.3□□□□□ -1.72
YBX3-205ENST00000536107 KCNH7Q9NS40 1196 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms