RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	RARS2	Q5T160	578 aa	Known RBP	5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	METRNL	Q641Q3	311 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ZDHHC24	Q6UX98	284 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MED25	Q71SY5	747 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ADGRA3	Q8IWK6	1321 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	VGLL2	Q8N8G2	317 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	FANCB	Q8NB91	859 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	PDPR	Q8NCN5	879 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	FAM46D	Q8NEK8	389 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MDGA1	Q8NFP4	955 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	DNER	Q8NFT8	737 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SPATA3	Q8NHX4	192 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CAGE1	Q8TC20	777 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ST8SIA2	Q92186	375 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	P2RX5	Q93086	422 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	LOXL4	Q96JB6	756 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SCLT1	Q96NL6	688 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	HEPH	Q9BQS7	1158 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	DDX23	Q9BUQ8	820 aa	Known RBP	5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	TBC1D23	Q9NUY8	699 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ZNFX1	Q9P2E3	1918 aa	Known RBP	5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MAGED2	Q9UNF1	606 aa	Predicted RBP	5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	TBC1D30	Q9Y2I9	924 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	RNF114	Q9Y508	228 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	GOLGA6L3	A6NEY3	463 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CDX4	O14627	284 aa	Predicted RBP	5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	FRAT2	O75474	233 aa	Predicted RBP	5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	NDST3	O95803	873 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MYL4	P12829	197 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	EIF2S2	P20042	333 aa	Known RBP	5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	BTF3	P20290	206 aa	Known RBP	5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CD72	P21854	359 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	GABRB3	P28472	473 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	PPM1F	P49593	454 aa	Predicted RBP	5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	EIF4A1	P60842	406 aa	Known RBP	5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MXRA7	P84157	204 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	FOXL1	Q12952	345 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ZNF124	Q15973	351 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	PFKFB4	Q16877	469 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	C1QL3	Q5VWW1	255 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	FAM160B1	Q5W0V3	765 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SLFN13	Q68D06	897 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	TLK2	Q86UE8	772 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CACNA2D3	Q8IZS8	1091 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SDR16C5	Q8N3Y7	309 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SPATA5	Q8NB90	893 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CCT6B	Q92526	530 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MUL1	Q969V5	352 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	LRRC46	Q96FV0	321 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	OR14A2	Q96R54	314 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	NEU1	Q99519	415 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MS4A7	Q9GZW8	240 aa	Predicted RBP	5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	LTB4R2	Q9NPC1	389 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	OBP2B	Q9NPH6	170 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ETAA1	Q9NY74	926 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	GRHPR	Q9UBQ7	328 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	HESX1	Q9UBX0	185 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ZNF212	Q9UDV6	495 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MID2	Q9UJV3	735 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	GPR52	Q9Y2T5	361 aa		5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ASCC3	Q8N3C0	2202 aa	Known RBP	5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	5.09	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ATG2B	Q96BY7	2078 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CCDC78	A2IDD5	438 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	FAM234B	A2RU67	622 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TRABD2B	A6NFA1	517 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	LGALS16	A8MUM7	142 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MYO1C	O00159	1063 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	HNRNPDL	O14979	420 aa	Known RBP	5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DCLK1	O15075	740 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	NPC1	O15118	1278 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TRIM13	O60858	407 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ENTPD3	O75355	529 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SKAP2	O75563	359 aa	Predicted RBP	5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CKB	P12277	381 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	GCSH	P23434	173 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	IL1R2	P27930	398 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MSX2	P35548	267 aa	Predicted RBP	5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DCT	P40126	519 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	RPS9	P46781	194 aa	Known RBP	5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	GYG1	P46976	350 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DCTN1	Q14203	1278 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ELAVL1	Q15717	326 aa	Known RBP	5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ZACN	Q401N2	412 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PRR16	Q569H4	304 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	METTL24	Q5JXM2	366 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TCTN3	Q6NUS6	607 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ZNF354C	Q86Y25	554 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CFAP52	Q8N1V2	620 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	C12orf76	Q8N812	135 aa	Predicted RBP	5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PNPLA1	Q8N8W4	532 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	GLIS1	Q8NBF1	620 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DBF4B	Q8NFT6	615 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CASP10	Q92851	521 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SPSB4	Q96A44	273 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CLDN23	Q96B33	292 aa		5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MARS2	Q96GW9	593 aa	Known RBP	5.08	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PHACTR3	Q96KR7	559 aa		5.08	□□□□□ -1.6

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