RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 FBXL13Q8NEE6 735 aa12.73□□□□□ -0.37
SRPRA-202ENST00000527817 OR4C6Q8NH72 309 aa12.73□□□□□ -0.37
SRPRA-202ENST00000527817 IRGQQ8WZA9 623 aa12.73□□□□□ -0.37
SRPRA-202ENST00000527817 MED8Q96G25 268 aa12.73□□□□□ -0.37
SRPRA-202ENST00000527817 PAGE5Q96GU1 130 aa12.73□□□□□ -0.37
SRPRA-202ENST00000527817 POLR1BQ9H9Y6 1135 aa12.73□□□□□ -0.37
SRPRA-202ENST00000527817 SERTAD1Q9UHV2 236 aa12.73□□□□□ -0.37
SRPRA-202ENST00000527817 KIAA1257Q9ULG3 409 aa12.73□□□□□ -0.37
SRPRA-202ENST00000527817 PRAMEF26H0Y7S4 382 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 SLC7A4O43246 635 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 RNGTTO60942 597 aaKnown RBP12.72□□□□□ -0.37
SRPRA-202ENST00000527817 SDC3O75056 442 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 USP12O75317 370 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 IL1BP01584 269 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 MPOP05164 745 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 SETSIPP0DME0 302 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 CKMT1AP12532 417 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 DGKAP23743 735 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 RPL13P26373 211 aaKnown RBP12.72□□□□□ -0.37
SRPRA-202ENST00000527817 MZF1P28698 734 aaPredicted RBP12.72□□□□□ -0.37
SRPRA-202ENST00000527817 GABREP78334 506 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 DAB2P98082 770 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 ADAM9Q13443 819 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 ELAVL3Q14576 367 aaKnown RBP12.72□□□□□ -0.37
SRPRA-202ENST00000527817 MS4A13Q5J8X5 152 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 IGF2-ASQ6U949 168 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 MMS22LQ6ZRQ5 1243 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 TRIM69Q86WT6 500 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 UBA3Q8TBC4 463 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 KCNE4Q8WWG9 221 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 MYEOVQ96EZ4 313 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 KLHDC7BQ96G42 594 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 DEPDC7Q96QD5 511 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 MMRN2Q9H8L6 949 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 KLHL11Q9NVR0 708 aa12.72□□□□□ -0.37
SRPRA-202ENST00000527817 KLK10O43240 276 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 PLRG1O43660 514 aaKnown RBP12.71□□□□□ -0.37
SRPRA-202ENST00000527817 ACTN4O43707 911 aaKnown RBP12.71□□□□□ -0.37
SRPRA-202ENST00000527817 GABBR2O75899 941 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 LUC7L3O95232 432 aaKnown RBP12.71□□□□□ -0.37
SRPRA-202ENST00000527817 MYL1P05976 194 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 GP1BAP07359 652 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 VDRP11473 427 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 LCP1P13796 627 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 NNMTP40261 264 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 SLC12A1Q13621 1099 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 CDH18Q13634 790 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 SETMARQ53H47 684 aaPredicted RBP12.71□□□□□ -0.37
SRPRA-202ENST00000527817 DCAF6Q58WW2 860 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 RNF219Q5W0B1 726 aaPredicted RBP12.71□□□□□ -0.37
SRPRA-202ENST00000527817 APCDD1Q8J025 514 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 SLC35F5Q8WV83 523 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 RPL10LQ96L21 214 aaKnown RBP12.71□□□□□ -0.37
SRPRA-202ENST00000527817 PRICKLE1Q96MT3 831 aaPredicted RBP12.71□□□□□ -0.37
SRPRA-202ENST00000527817 SPAG5Q96R06 1193 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 ASCL3Q9NQ33 180 aa12.71□□□□□ -0.37
SRPRA-202ENST00000527817 TDRD6O60522 2096 aaKnown RBP12.71□□□□□ -0.38
SRPRA-202ENST00000527817 COL12A1Q99715 3063 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 O00370 1275 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 LZTS3O60299 673 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-202ENST00000527817 STX10O60499 249 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 RTN2O75298 545 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 LTFP02788 710 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 GIMD1P0DJR0 217 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 MAT2AP31153 395 aaKnown RBP12.7□□□□□ -0.38
SRPRA-202ENST00000527817 ME1P48163 572 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 MXI1P50539 228 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-202ENST00000527817 DUSP3P51452 185 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-202ENST00000527817 YWHAEP62258 255 aaKnown RBP12.7□□□□□ -0.38
SRPRA-202ENST00000527817 SKOR1P84550 965 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 SULT2A1Q06520 285 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 KCNMA1Q12791 1236 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 NNTQ13423 1086 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 FAM46CQ5VWP2 391 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 LCLAT1Q6UWP7 414 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 CFAP52Q8N1V2 620 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 GRAMD1AQ96CP6 724 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 EEF2KMTQ96G04 330 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 SLC39A13Q96H72 371 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 VCPIP1Q96JH7 1222 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 FCRL2Q96LA5 508 aaPredicted RBP12.7□□□□□ -0.38
SRPRA-202ENST00000527817 NUCKS1Q9H1E3 243 aaKnown RBP12.7□□□□□ -0.38
SRPRA-202ENST00000527817 USP29Q9HBJ7 922 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 THSD1Q9NS62 852 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 UCKL1Q9NWZ5 548 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 USP25Q9UHP3 1055 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 SARDHQ9UL12 918 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 TLR6Q9Y2C9 796 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 CEP83Q9Y592 693 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 PTPN13Q12923 2485 aa12.7□□□□□ -0.38
SRPRA-202ENST00000527817 A0A1B0GVM2 712 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 K7ENP7 123 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 CSO75390 466 aaKnown RBP12.69□□□□□ -0.38
SRPRA-202ENST00000527817 RHOBTB3O94955 611 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 THEGLP0DJG4 465 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 ALPPL2P10696 532 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 CD19P15391 556 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 PLK1P53350 603 aa12.69□□□□□ -0.38
SRPRA-202ENST00000527817 METAP1P53582 386 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms