RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 CIDEBQ9UHD4 219 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 APOC4-APOC2K7ER74 178 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 GYG2O15488 501 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 DUSP11O75319 330 aaKnown RBP10.1□□□□□ -0.79
USP35-201ENST00000526425 F2P00734 622 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 APOC2P02655 101 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 HMBSP08397 361 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 USP17L7P0C7H9 530 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 DARSP14868 501 aaKnown RBP10.1□□□□□ -0.79
USP35-201ENST00000526425 BCAT1P54687 386 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 TMPRSS15P98073 1019 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 RELAQ04206 551 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 BST2Q10589 180 aaKnown RBP10.1□□□□□ -0.79
USP35-201ENST00000526425 MED21Q13503 144 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 SV2CQ496J9 727 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 EFHC2Q5JST6 749 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 TAF2Q6P1X5 1199 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 B3GNT6Q6ZMB0 384 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 BBS12Q6ZW61 710 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 PEBP4Q96S96 227 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 VPS11Q9H270 941 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 PCDH12Q9NPG4 1184 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 STAP1Q9ULZ2 295 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 FADS3Q9Y5Q0 445 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 IQANK1A0A1B0GTG1 560 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 ZSCAN5BA6NJL1 495 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 DFFAO00273 331 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 PAPSS1O43252 624 aaPredicted RBP10.1□□□□□ -0.79
USP35-201ENST00000526425 KPNA6O60684 536 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 PRKAR2AP13861 404 aaKnown RBP10.1□□□□□ -0.79
USP35-201ENST00000526425 ADRA1DP25100 572 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 GRM5P41594 1212 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 MMP13P45452 471 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 CLDN10P78369 228 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 CD300CQ08708 224 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 KLHL38Q2WGJ6 581 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 C9orf57Q5W0N0 161 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 METTL23Q86XA0 190 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 C12orf50Q8NA57 414 aaPredicted RBP10.1□□□□□ -0.79
USP35-201ENST00000526425 TMEM40Q8WWA1 233 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 CPT1BQ92523 772 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 TLCD1Q96CP7 247 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 FAM161BQ96MY7 647 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 FAM193BQ96PV7 902 aaPredicted RBP10.1□□□□□ -0.79
USP35-201ENST00000526425 ARHGAP39Q9C0H5 1083 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 MYLK2Q9H1R3 596 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 EPB41L4BQ9H329 900 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 C6orf203Q9P0P8 240 aaPredicted RBP10.1□□□□□ -0.79
USP35-201ENST00000526425 CDY2AQ9Y6F7 541 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 TOMM70O94826 608 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 TMEM63AO94886 807 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 ESRRAP11474 423 aaPredicted RBP10.09□□□□□ -0.79
USP35-201ENST00000526425 TPI1P60174 286 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 ADAM17P78536 824 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 MSS51Q4VC12 460 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 VASH1Q7L8A9 365 aaPredicted RBP10.09□□□□□ -0.79
USP35-201ENST00000526425 MYO1HQ8N1T3 1032 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 RNF157Q96PX1 679 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 PCDHGC3Q9UN70 934 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 IPPQ9Y573 584 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 SMIM35A0A1B0GVV1 85 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 C5orf60A6NFR6 353 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 SH3BP5O60239 455 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 CHEK2O96017 543 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 ZNF865P0CJ78 1059 aaPredicted RBP10.09□□□□□ -0.79
USP35-201ENST00000526425 ALADP13716 330 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 ZNF132P52740 706 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 FAAP100Q0VG06 881 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 SOWAHAQ2M3V2 549 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 MMEL1Q495T6 779 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 SKA1Q96BD8 255 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 SENP8Q96LD8 212 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 PPP1R36Q96LQ0 422 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 RHOBTB2Q9BYZ6 727 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 ULBP1Q9BZM6 244 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 UBN1Q9NPG3 1134 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 PAK5Q9P286 719 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 APPL1Q9UKG1 709 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 COQ6Q9Y2Z9 468 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 MFHAS1Q9Y4C4 1052 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 SNX10Q9Y5X0 201 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 A8MX80 341 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 EEF2KO00418 725 aaKnown RBP10.09□□□□□ -0.79
USP35-201ENST00000526425 KRT37O76014 449 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 FBXO21O94952 628 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 THP07101 528 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 CDK4P11802 303 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 STT3AP46977 705 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 POU5F1BQ06416 359 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 KLF1Q13351 362 aaPredicted RBP10.09□□□□□ -0.79
USP35-201ENST00000526425 CAMK2BQ13554 666 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 STILQ15468 1287 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 CCDC14Q49A88 953 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 LCLAT1Q6UWP7 414 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 TMC5Q6UXY8 1006 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 RNF180Q86T96 592 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 CDKL3Q8IVW4 592 aaPredicted RBP10.09□□□□□ -0.79
USP35-201ENST00000526425 GOLM1Q8NBJ4 401 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 PGLYRP2Q96PD5 576 aa10.09□□□□□ -0.79
USP35-201ENST00000526425 RNF38Q9H0F5 515 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms