RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 EPHA8P29322 1005 aaPredicted RBP24.74■■□□□ 1.55
USP47-205ENST00000525257 GPD2P43304 727 aa24.74■■□□□ 1.55
USP47-205ENST00000525257 NUCB2P80303 420 aa24.74■■□□□ 1.55
USP47-205ENST00000525257 CETN1Q12798 172 aa24.74■■□□□ 1.55
USP47-205ENST00000525257 STIM1Q13586 685 aa24.74■■□□□ 1.55
USP47-205ENST00000525257 ISM2Q6H9L7 571 aa24.74■■□□□ 1.55
USP47-205ENST00000525257 SPATA20Q8TB22 786 aa24.74■■□□□ 1.55
USP47-205ENST00000525257 NXPE2Q96DL1 559 aa24.74■■□□□ 1.55
USP47-205ENST00000525257 CEP63Q96MT8 703 aa24.74■■□□□ 1.55
USP47-205ENST00000525257 TBC1D3DA0A087WVF3 549 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 TBC1D3IA0A087WXS9 549 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 TBC1D3EA0A087X179 549 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 TBC1D3KA0A087X1G2 549 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 TBC1D3FA6NER0 549 aaPredicted RBP24.73■■□□□ 1.55
USP47-205ENST00000525257 TBC1D3LB9A6J9 549 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 YKT6O15498 198 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 TBC1D3HP0C7X1 549 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 ABCG1P45844 678 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 RPL34P49207 117 aaKnown RBP24.73■■□□□ 1.55
USP47-205ENST00000525257 ARRB1P49407 418 aaPredicted RBP24.73■■□□□ 1.55
USP47-205ENST00000525257 ACADVLP49748 655 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 NXPH1P58417 271 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 GCNT1Q02742 428 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 ELAVL3Q14576 367 aaKnown RBP24.73■■□□□ 1.55
USP47-205ENST00000525257 TBC1D3GQ6DHY5 549 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 TBC1D3CQ6IPX1 549 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 DENND1BQ6P3S1 775 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.73■■□□□ 1.55
USP47-205ENST00000525257 CIR1Q86X95 450 aaPredicted RBP24.73■■□□□ 1.55
USP47-205ENST00000525257 TBC1D3Q8IZP1 549 aaPredicted RBP24.73■■□□□ 1.55
USP47-205ENST00000525257 PIP4K2CQ8TBX8 421 aa24.73■■□□□ 1.55
USP47-205ENST00000525257 ASXL3Q9C0F0 2248 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 TLR4O00206 839 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 KRT5P13647 590 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 CD44P16070 742 aaKnown RBP24.72■■□□□ 1.55
USP47-205ENST00000525257 PDGFRAP16234 1089 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 DRD3P35462 400 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 NNMTP40261 264 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 ACADSBP45954 432 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 METAP1P53582 386 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 BNIP3Q12983 259 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 SLC45A4Q5BKX6 768 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 C6orf118Q5T5N4 469 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 BTN2A3PQ96KV6 586 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 KREMEN1Q96MU8 473 aa24.72■■□□□ 1.55
USP47-205ENST00000525257 GTPBP4Q9BZE4 634 aaKnown RBP24.72■■□□□ 1.55
USP47-205ENST00000525257 GOLGA6L4A6NEF3 574 aa24.71■■□□□ 1.55
USP47-205ENST00000525257 F5H5T6 163 aa24.71■■□□□ 1.55
USP47-205ENST00000525257 P4HA2O15460 535 aa24.71■■□□□ 1.55
USP47-205ENST00000525257 TRUB2O95900 331 aaKnown RBP24.71■■□□□ 1.55
USP47-205ENST00000525257 C1SP09871 688 aa24.71■■□□□ 1.55
USP47-205ENST00000525257 PITX1P78337 314 aaPredicted RBP24.71■■□□□ 1.55
USP47-205ENST00000525257 HES3Q5TGS1 186 aa24.71■■□□□ 1.55
USP47-205ENST00000525257 NAPEPLDQ6IQ20 393 aa24.71■■□□□ 1.55
USP47-205ENST00000525257 KLHL10Q6JEL2 608 aa24.71■■□□□ 1.55
USP47-205ENST00000525257 BEND5Q7L4P6 421 aa24.71■■□□□ 1.55
USP47-205ENST00000525257 EHBP1Q8NDI1 1231 aa24.71■■□□□ 1.55
USP47-205ENST00000525257 DHTKD1Q96HY7 919 aaPredicted RBP24.71■■□□□ 1.55
USP47-205ENST00000525257 TRIM62Q9BVG3 475 aa24.71■■□□□ 1.55
USP47-205ENST00000525257 POPDC2Q9HBU9 364 aa24.71■■□□□ 1.55
USP47-205ENST00000525257 CYTH4Q9UIA0 394 aa24.71■■□□□ 1.55
USP47-205ENST00000525257 E5RJQ4 531 aa24.7■■□□□ 1.54
USP47-205ENST00000525257 LATO43561 262 aa24.7■■□□□ 1.54
USP47-205ENST00000525257 CDK4P11802 303 aa24.7■■□□□ 1.54
USP47-205ENST00000525257 MAT2AP31153 395 aaKnown RBP24.7■■□□□ 1.54
USP47-205ENST00000525257 SEMG2Q02383 582 aa24.7■■□□□ 1.54
USP47-205ENST00000525257 TARDBPQ13148 414 aaKnown RBP eCLIP24.7■■□□□ 1.54
USP47-205ENST00000525257 SPATS2Q86XZ4 545 aaKnown RBP24.7■■□□□ 1.54
USP47-205ENST00000525257 CCAR2Q8N163 923 aaKnown RBP24.7■■□□□ 1.54
USP47-205ENST00000525257 ATP6V0D2Q8N8Y2 350 aa24.7■■□□□ 1.54
USP47-205ENST00000525257 SPAG5Q96R06 1193 aa24.7■■□□□ 1.54
USP47-205ENST00000525257 SLC4A5Q9BY07 1137 aa24.7■■□□□ 1.54
USP47-205ENST00000525257 TPX2Q9ULW0 747 aaKnown RBP24.7■■□□□ 1.54
USP47-205ENST00000525257 AK5Q9Y6K8 562 aa24.7■■□□□ 1.54
USP47-205ENST00000525257 MYLKQ15746 1914 aa24.7■■□□□ 1.54
USP47-205ENST00000525257 RTN2O75298 545 aa24.69■■□□□ 1.54
USP47-205ENST00000525257 LETM1O95202 739 aaPredicted RBP24.69■■□□□ 1.54
USP47-205ENST00000525257 IGLV3-25P01717 112 aa24.69■■□□□ 1.54
USP47-205ENST00000525257 ITPKBP27987 946 aa24.69■■□□□ 1.54
USP47-205ENST00000525257 SLC12A1Q13621 1099 aa24.69■■□□□ 1.54
USP47-205ENST00000525257 TTI2Q6NXR4 508 aa24.69■■□□□ 1.54
USP47-205ENST00000525257 PRPF39Q86UA1 669 aaKnown RBP24.69■■□□□ 1.54
USP47-205ENST00000525257 OXR1Q8N573 874 aa24.69■■□□□ 1.54
USP47-205ENST00000525257 FRS2Q8WU20 508 aa24.69■■□□□ 1.54
USP47-205ENST00000525257 TSC1Q92574 1164 aa24.69■■□□□ 1.54
USP47-205ENST00000525257 ERVMER34-1Q9H9K5 563 aa24.69■■□□□ 1.54
USP47-205ENST00000525257 HOOK1Q9UJC3 728 aaKnown RBP24.69■■□□□ 1.54
USP47-205ENST00000525257 SYNJ2BP-COX16A0A087WUM0 186 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 KCNU1A8MYU2 1149 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 TLX3O43711 291 aaPredicted RBP24.68■■□□□ 1.54
USP47-205ENST00000525257 RXRGP48443 463 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 YWHAZP63104 245 aaKnown RBP24.68■■□□□ 1.54
USP47-205ENST00000525257 SULT2A1Q06520 285 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 KCNH2Q12809 1159 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 TAF5Q15542 800 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 POM121L1PQ3SYA9 428 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 SFMBT2Q5VUG0 894 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 FBXL19Q6PCT2 694 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 MFSD2AQ8NA29 543 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 STK32AQ8WU08 396 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms