RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 TYRO3Q06418 890 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 ZNF177Q13360 481 aaPredicted RBP19.25■□□□□ 0.67
SPIDR-220ENST00000522900 C5orf22Q49AR2 442 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 RAB6CQ53S08 254 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 ALFQ53S48 1182 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 BRMS1LQ5PSV4 323 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 ARTNQ5T4W7 220 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 ZNF677Q86XU0 584 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 MMAAQ8IVH4 418 aaKnown RBP19.25■□□□□ 0.67
SPIDR-220ENST00000522900 ZNF683Q8IZ20 524 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 AOPEPQ8N6M6 819 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 EMC1Q8N766 993 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 DEFB124Q8NES8 71 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 PTPRN2Q92932 1015 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 PCMTD1Q96MG8 357 aaPredicted RBP19.25■□□□□ 0.67
SPIDR-220ENST00000522900 CFAP57Q96MR6 1250 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 CNTNAP3BQ96NU0 1288 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 SPAG5Q96R06 1193 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 PCDHB18PQ96TA0 734 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 FEM1AQ9BSK4 669 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 CNTNAP3Q9BZ76 1288 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 RAB6CQ9H0N0 254 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 PABPC3Q9H361 631 aaKnown RBP19.25■□□□□ 0.67
SPIDR-220ENST00000522900 SUSD2Q9UGT4 822 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 OR51B4Q9Y5P0 310 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 ITIH6Q6UXX5 1313 aa19.25■□□□□ 0.67
SPIDR-220ENST00000522900 A0A1B0GTW7 788 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 TARSL2A2RTX5 802 aaKnown RBP19.24■□□□□ 0.67
SPIDR-220ENST00000522900 MID1O15344 667 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 F9P00740 461 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 ATP1A3P13637 1013 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 CSRP1P21291 193 aaKnown RBP19.24■□□□□ 0.67
SPIDR-220ENST00000522900 MMP8P22894 467 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 PMLP29590 882 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 STAT1P42224 750 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 SEMA3BQ13214 749 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 RNF219Q5W0B1 726 aaPredicted RBP19.24■□□□□ 0.67
SPIDR-220ENST00000522900 BNIPLQ7Z465 357 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 STK40Q8N2I9 435 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 GANCQ8TET4 914 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 SNX19Q92543 992 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 BTBD1Q9H0C5 482 aa19.24■□□□□ 0.67
SPIDR-220ENST00000522900 PCDH15Q96QU1 1955 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 EDDM13A0A1B0GTR0 161 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 GJB6O95452 261 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 SEMA4FO95754 770 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 SYPP08247 313 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 CEACAM1P13688 526 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 BNC1Q01954 994 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 GRIK2Q13002 908 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 MTA1Q13330 715 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 CST6Q15828 149 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 SND1Q7KZF4 910 aaKnown RBP eCLIP19.23■□□□□ 0.67
SPIDR-220ENST00000522900 PIP4P1Q86T03 277 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 MSANTD4Q8NCY6 345 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 ANKRD20A12PQ8NF67 263 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 NEK11Q8NG66 645 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 FRS2Q8WU20 508 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 BIRC7Q96CA5 298 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 PCED1AQ9H1Q7 454 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 NEUROG2Q9H2A3 272 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 METTL5Q9NRN9 209 aaKnown RBP19.23■□□□□ 0.67
SPIDR-220ENST00000522900 FBXL12Q9NXK8 326 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 TBC1D30Q9Y2I9 924 aa19.23■□□□□ 0.67
SPIDR-220ENST00000522900 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.23■□□□□ 0.67
SPIDR-220ENST00000522900 A0A1W2PP55 124 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 DRGXA6NNA5 263 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 BCAT2O15382 392 aaPredicted RBP19.22■□□□□ 0.67
SPIDR-220ENST00000522900 OPHN1O60890 802 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 RNASEH1O60930 286 aaKnown RBP19.22■□□□□ 0.67
SPIDR-220ENST00000522900 CLDN11O75508 207 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 GJB3O75712 270 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 FSBPO95073 299 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 UNGP13051 313 aaPredicted RBP19.22■□□□□ 0.67
SPIDR-220ENST00000522900 CD59P13987 128 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 SLC8A1P32418 973 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 CDH4P55283 916 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 OXCT1P55809 520 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 ATP11AP98196 1134 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 SULT2A1Q06520 285 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 PTP4A2Q12974 167 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 TTC31Q49AM3 519 aaPredicted RBP19.22■□□□□ 0.67
SPIDR-220ENST00000522900 ANO6Q4KMQ2 910 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 USP30Q70CQ3 517 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 FAM131BQ86XD5 332 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 HDDC3Q8N4P3 179 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 AADATQ8N5Z0 425 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 JOSD2Q8TAC2 188 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 C1orf74Q96LT6 269 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 ERGIC2Q96RQ1 377 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 C11orf70Q9BRQ4 267 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 SGK2Q9HBY8 427 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 DNAAF2Q9NVR5 837 aaKnown RBP19.22■□□□□ 0.67
SPIDR-220ENST00000522900 MPP6Q9NZW5 540 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 NCKAP1Q9Y2A7 1128 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 DAAM1Q9Y4D1 1078 aa19.22■□□□□ 0.67
SPIDR-220ENST00000522900 ADAMTS9Q9P2N4 1935 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 A0A1B0GVT2 93 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 FAM47DPA6NHR8 397 aa19.21■□□□□ 0.67
SPIDR-220ENST00000522900 TEX33O43247 280 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms