RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 COQ6Q9Y2Z9 468 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 RRP15Q9Y3B9 282 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 PCDHGB5Q9Y5G0 923 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 MTCH2Q9Y6C9 303 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 STYXL1Q9Y6J8 313 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 MYH9P35579 1960 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 UBE4BO95155 1302 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 KAT6AQ92794 2004 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 C17orf113A0A1B0GUU1 675 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 SHISA3A0PJX4 238 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 PRR33A8MZF0 331 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 FAM227AF5H4B4 570 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 I3L4J1 428 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 KIAA0391O15091 583 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 CETN3O15182 167 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 INPPL1O15357 1258 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 MEFVO15553 781 aaPredicted RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 TGM5O43548 720 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 TRAPPC3O43617 180 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 B3GALT2O43825 422 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 FAM189A1O60320 539 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 B4GALT3O60512 393 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 MBD3O95983 291 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 TNNC2P02585 160 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 TMEM191BP0C7N4 346 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 LINC00271P0C7V0 271 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 KRT13P13646 458 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 C5AR1P21730 350 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 NR2F2P24468 414 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 IGFBP6P24592 240 aaPredicted RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 KLRC2P26717 231 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 MAP4P27816 1152 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 RPL9P32969 192 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 NRIP1P48552 1158 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 KPNA1P52294 538 aaPredicted RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 ITGA8P53708 1063 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 DRG2P55039 364 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 ARPP19P56211 112 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 STX17P56962 302 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 ERVFC1P60507 584 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 AMPD2Q01433 879 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 ALDH6A1Q02252 535 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 UBE3AQ05086 875 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 DSC1Q08554 894 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 SPARCL1Q14515 664 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 PSMD6Q15008 389 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 CNN3Q15417 329 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 UPP1Q16831 310 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 TPD52L1Q16890 204 aaPredicted RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 BMT2Q1RMZ1 405 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 USP41Q3LFD5 358 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 XKR4Q5GH76 650 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 TCEAL5Q5H9L2 206 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 FAM171A1Q5VUB5 890 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 ANKRD40Q6AI12 368 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 CAVIN1Q6NZI2 390 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 SASS6Q6UVJ0 657 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 DSTYKQ6XUX3 929 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 MAMDC2Q7Z304 686 aaPredicted RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 GALNTL5Q7Z4T8 443 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 DDX53Q86TM3 631 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 TMEM173Q86WV6 379 aaPredicted RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 FAM20CQ8IXL6 584 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 ADSSL1Q8N142 457 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 KRT78Q8N1N4 520 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 CSGALNACT2Q8N6G5 542 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 TEX9Q8N6V9 391 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 SPATA20Q8TB22 786 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 NELFBQ8WX92 580 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 RIN2Q8WYP3 895 aaPredicted RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 KCNN1Q92952 543 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 JAKMIP2Q96AA8 810 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 C18orf8Q96DM3 657 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 ANKRD36BP1Q96IX9 119 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 B3GALT6Q96L58 329 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 MYRFLQ96LU7 910 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 SLX1AQ9BQ83 275 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 GPR62Q9BZJ7 368 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 KCTD10Q9H3F6 313 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 GHITMQ9H3K2 345 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 NSUN3Q9H649 340 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 ASB7Q9H672 318 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 MMRN2Q9H8L6 949 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 WASH6PQ9NQA3 447 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 MRPL17Q9NRX2 175 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 ABCF3Q9NUQ8 709 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 DPP3Q9NY33 737 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 LMCD1Q9NZU5 365 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 STK39Q9UEW8 545 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 TBC1D29Q9UFV1 150 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 TMEFF2Q9UIK5 374 aaPredicted RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 ADAM28Q9UKQ2 775 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 UBQLN1Q9UMX0 589 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 AGAP1Q9UPQ3 857 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 CTNND2Q9UQB3 1225 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 STXBP5LQ9Y2K9 1186 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 ZKSCAN5Q9Y2L8 839 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 DERAQ9Y315 318 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 SF3B6Q9Y3B4 125 aaKnown RBP2.91□□□□□ -1.94
SKP1-204ENST00000517691 NPFFR2Q9Y5X5 522 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms