RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 CLLU1OSQ5K130 101 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 HP1BP3Q5SSJ5 553 aaPredicted RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 TTC7BQ86TV6 843 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 ATXN7L3BQ96GX2 97 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 MS4A14Q96JA4 679 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 KREMEN1Q96MU8 473 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 KXD1Q9BQD3 176 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 DDX23Q9BUQ8 820 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 MLPHQ9BV36 600 aaPredicted RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 RCOR3Q9P2K3 495 aaPredicted RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 RNF103O00237 685 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 NBNO60934 754 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 SLC2A4P14672 509 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 BRAFP15056 766 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CARSP49589 748 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 DSG1Q02413 1049 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 MPP3Q13368 585 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 SMAD1Q15797 465 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 PHKG1Q16816 387 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CLEC20AQ6ZU45 233 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 TRMT10CQ7L0Y3 403 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 POLNQ7Z5Q5 900 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 PSTKQ8IV42 348 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 SPATA4Q8NEY3 305 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 TMEM159Q96B96 161 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CABS1Q96KC9 395 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 WDR6Q9NNW5 1121 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 PNPLA8Q9NP80 782 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 MED4Q9NPJ6 270 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 KCTD5Q9NXV2 234 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CLIC5Q9NZA1 410 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 KLHL14Q9P2G3 628 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 DYRK1BQ9Y463 629 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 NRXN2Q9P2S2 1712 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 H0YGN5 161 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 QSOX1O00391 747 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 MAP3K6O95382 1288 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 GJB6O95452 261 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 VCPP55072 806 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 ZCWPW2Q504Y3 356 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 SLC39A11Q8N1S5 342 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CFAP52Q8N1V2 620 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CRYGNQ8WXF5 182 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CEP295NLQ96MC4 621 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CPSF2Q9P2I0 782 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 HECAQ9UBI9 543 aaPredicted RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 GMEB2Q9UKD1 530 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 GPSM3Q9Y4H4 160 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 QSER1Q2KHR3 1735 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 ALPPL2P10696 532 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 DGKEP52429 567 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 MEA1Q16626 185 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 IRAK1BP1Q5VVH5 260 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 SLC39A4Q6P5W5 647 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 TMCO2Q7Z6W1 182 aaPredicted RBP5.23□□□□□ -1.57
PHF3-210ENST00000509876 DEFB123Q8N688 67 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 HDAC7Q8WUI4 952 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 MYO19Q96H55 970 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 SPATA17Q96L03 361 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 PANX3Q96QZ0 392 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 CCDC3Q9BQI4 270 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 C17orf80Q9BSJ5 609 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 FUCA2Q9BTY2 467 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 APOBEC3GQ9HC16 384 aaKnown RBP5.23□□□□□ -1.57
PHF3-210ENST00000509876 INTS9Q9NV88 658 aaKnown RBP5.23□□□□□ -1.57
PHF3-210ENST00000509876 SMARCAL1Q9NZC9 954 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 SLC13A4Q9UKG4 626 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 CHMP2BQ9UQN3 213 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 TARSL2A2RTX5 802 aaKnown RBP5.23□□□□□ -1.57
PHF3-210ENST00000509876 ERI2A8K979 691 aaKnown RBP5.23□□□□□ -1.57
PHF3-210ENST00000509876 RASA4BC9J798 803 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 TEX28O15482 410 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 RASA4O43374 803 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 ELFN1P0C7U0 828 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 AKT2P31751 481 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 WASP42768 502 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 PTPN9P43378 593 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 ITGA8P53708 1063 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 TPD52P55327 224 aaPredicted RBP5.23□□□□□ -1.57
PHF3-210ENST00000509876 IRX4P78413 519 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 RAB33AQ14088 237 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 TRADDQ15628 312 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 TAC4Q86UU9 113 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 HOMEZQ8IX15 550 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 STK40Q8N2I9 435 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 LNX1Q8TBB1 728 aaPredicted RBP5.23□□□□□ -1.57
PHF3-210ENST00000509876 MAGEC3Q8TD91 643 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 CASKIN2Q8WXE0 1202 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 ZBTB9Q96C00 473 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 KCNK16Q96T55 309 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 MAGEH1Q9H213 219 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 TMPRSS4Q9NRS4 437 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 SENP1Q9P0U3 644 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 ERICH4A6NGS2 130 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 H3BMM5 538 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 RARAP10276 462 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 CCNB1P14635 433 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 PFKLP17858 780 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 CYP2A7P20853 494 aa5.23□□□□□ -1.57
PHF3-210ENST00000509876 HMOX2P30519 316 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms