RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 SEMG2Q02383 582 aa23.78■■□□□ 1.4
CALCOCO2-209ENST00000507076 BNIP3Q12983 259 aa23.78■■□□□ 1.4
CALCOCO2-209ENST00000507076 HES3Q5TGS1 186 aa23.78■■□□□ 1.4
CALCOCO2-209ENST00000507076 ARHGEF19Q8IW93 802 aa23.78■■□□□ 1.4
CALCOCO2-209ENST00000507076 GSDMAQ96QA5 445 aa23.78■■□□□ 1.4
CALCOCO2-209ENST00000507076 METTL14Q9HCE5 456 aaKnown RBP23.78■■□□□ 1.4
CALCOCO2-209ENST00000507076 TJP2Q9UDY2 1190 aa23.78■■□□□ 1.4
CALCOCO2-209ENST00000507076 ATP6V1DQ9Y5K8 247 aa23.78■■□□□ 1.4
CALCOCO2-209ENST00000507076 TBC1D3DA0A087WVF3 549 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 TBC1D3IA0A087WXS9 549 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 TBC1D3EA0A087X179 549 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 TBC1D3KA0A087X1G2 549 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 TBC1D3FA6NER0 549 aaPredicted RBP23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 TBC1D3LB9A6J9 549 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 TLR4O00206 839 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 YKT6O15498 198 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 TBC1D3HP0C7X1 549 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 TACR2P21452 398 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 TARDBPQ13148 414 aaKnown RBP eCLIP23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 CCDC40Q4G0X9 1142 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 SLC45A4Q5BKX6 768 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 ZC3H12AQ5D1E8 599 aaKnown RBP23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 TBC1D3GQ6DHY5 549 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 TBC1D3CQ6IPX1 549 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 CIR1Q86X95 450 aaPredicted RBP23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 TBC1D3Q8IZP1 549 aaPredicted RBP23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 FMR1NBQ8N0W7 255 aaPredicted RBP23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 LMO3Q8TAP4 145 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 AK5Q9Y6K8 562 aa23.77■■□□□ 1.4
CALCOCO2-209ENST00000507076 CAPN9O14815 690 aa23.76■■□□□ 1.39
CALCOCO2-209ENST00000507076 TLX3O43711 291 aaPredicted RBP23.76■■□□□ 1.39
CALCOCO2-209ENST00000507076 PDGFRAP16234 1089 aa23.76■■□□□ 1.39
CALCOCO2-209ENST00000507076 DRD3P35462 400 aa23.76■■□□□ 1.39
CALCOCO2-209ENST00000507076 NUCB2P80303 420 aa23.76■■□□□ 1.39
CALCOCO2-209ENST00000507076 ELAVL3Q14576 367 aaKnown RBP23.76■■□□□ 1.39
CALCOCO2-209ENST00000507076 NAPEPLDQ6IQ20 393 aa23.76■■□□□ 1.39
CALCOCO2-209ENST00000507076 DENND1BQ6P3S1 775 aa23.76■■□□□ 1.39
CALCOCO2-209ENST00000507076 SMARCE1Q969G3 411 aa23.76■■□□□ 1.39
CALCOCO2-209ENST00000507076 PTPRQQ9UMZ3 2332 aa23.76■■□□□ 1.39
CALCOCO2-209ENST00000507076 SART1O43290 800 aaKnown RBP23.75■■□□□ 1.39
CALCOCO2-209ENST00000507076 LATO43561 262 aa23.75■■□□□ 1.39
CALCOCO2-209ENST00000507076 PRB1P04280 392 aa23.75■■□□□ 1.39
CALCOCO2-209ENST00000507076 C1SP09871 688 aa23.75■■□□□ 1.39
CALCOCO2-209ENST00000507076 MAT2AP31153 395 aaKnown RBP23.75■■□□□ 1.39
CALCOCO2-209ENST00000507076 GPD2P43304 727 aa23.75■■□□□ 1.39
CALCOCO2-209ENST00000507076 PITX1P78337 314 aaPredicted RBP23.75■■□□□ 1.39
CALCOCO2-209ENST00000507076 ISM2Q6H9L7 571 aa23.75■■□□□ 1.39
CALCOCO2-209ENST00000507076 FBXL19Q6PCT2 694 aa23.75■■□□□ 1.39
CALCOCO2-209ENST00000507076 SPATS2Q86XZ4 545 aaKnown RBP23.75■■□□□ 1.39
CALCOCO2-209ENST00000507076 TSC1Q92574 1164 aa23.75■■□□□ 1.39
CALCOCO2-209ENST00000507076 F5H5T6 163 aa23.74■■□□□ 1.39
CALCOCO2-209ENST00000507076 RTN2O75298 545 aa23.74■■□□□ 1.39
CALCOCO2-209ENST00000507076 SMC2O95347 1197 aa23.74■■□□□ 1.39
CALCOCO2-209ENST00000507076 CDK4P11802 303 aa23.74■■□□□ 1.39
CALCOCO2-209ENST00000507076 NNMTP40261 264 aa23.74■■□□□ 1.39
CALCOCO2-209ENST00000507076 RPL34P49207 117 aaKnown RBP23.74■■□□□ 1.39
CALCOCO2-209ENST00000507076 SFMBT2Q5VUG0 894 aa23.74■■□□□ 1.39
CALCOCO2-209ENST00000507076 CCAR2Q8N163 923 aaKnown RBP23.74■■□□□ 1.39
CALCOCO2-209ENST00000507076 BTN2A3PQ96KV6 586 aa23.74■■□□□ 1.39
CALCOCO2-209ENST00000507076 KREMEN1Q96MU8 473 aa23.74■■□□□ 1.39
CALCOCO2-209ENST00000507076 UBL7Q96S82 380 aaPredicted RBP23.74■■□□□ 1.39
CALCOCO2-209ENST00000507076 PSMA7O14818 248 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 PMM2O15305 246 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 SDC3O75056 442 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 TRUB2O95900 331 aaKnown RBP23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 KRT5P13647 590 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 EIF2S3P41091 472 aaKnown RBP23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 ACADSBP45954 432 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 GCNT1Q02742 428 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 CETN1Q12798 172 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 POM121L1PQ3SYA9 428 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 PRPF39Q86UA1 669 aaKnown RBP23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 OXR1Q8N573 874 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 SPATA20Q8TB22 786 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 CEP63Q96MT8 703 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 SPAG5Q96R06 1193 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 ERVMER34-1Q9H9K5 563 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 CYTH4Q9UIA0 394 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 SARDHQ9UL12 918 aa23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 TPX2Q9ULW0 747 aaKnown RBP23.73■■□□□ 1.39
CALCOCO2-209ENST00000507076 E5RJQ4 531 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 ZIC2O95409 532 aaPredicted RBP23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 IGLV3-25P01717 112 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 CD44P16070 742 aaKnown RBP23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 RXRGP48443 463 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 STIM1Q13586 685 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 LRRC69Q6ZNQ3 347 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 KANSL1Q7Z3B3 1105 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 ATP6V0D2Q8N8Y2 350 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 MFSD2AQ8NA29 543 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 FRS2Q8WU20 508 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 TRIM62Q9BVG3 475 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 SLC4A5Q9BY07 1137 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 POPDC2Q9HBU9 364 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 ARHGAP20Q9P2F6 1191 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 CA5BQ9Y2D0 317 aa23.72■■□□□ 1.39
CALCOCO2-209ENST00000507076 SYNJ2BP-COX16A0A087WUM0 186 aa23.71■■□□□ 1.39
CALCOCO2-209ENST00000507076 CENPCQ03188 943 aa23.71■■□□□ 1.39
CALCOCO2-209ENST00000507076 SLC12A1Q13621 1099 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms