RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.24□□□□□ -0.77
NEDD9-210ENST00000505589 YJEFN3A6XGL0 299 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 E7ENQ6 273 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 CETN3O15182 167 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 ALOX15BO15296 676 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 KLK10O43240 276 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 SIGLEC6O43699 453 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 USP12O75317 370 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 WISP1O95388 367 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 EPB41P11171 864 aaKnown RBP10.24□□□□□ -0.77
NEDD9-210ENST00000505589 SFTPCP11686 197 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 CKMT1AP12532 417 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 LCP1P13796 627 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 CD19P15391 556 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 MLLT3P42568 568 aaPredicted RBP10.24□□□□□ -0.77
NEDD9-210ENST00000505589 PSMD8P48556 350 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 MXI1P50539 228 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 DAOAP59103 153 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 PPP3CAQ08209 521 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 KCNJ12Q14500 433 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 PITRM1Q5JRX3 1037 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 ARHGAP40Q5TG30 622 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 RFWD3Q6PCD5 774 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 TRIM69Q86WT6 500 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 KIAA0895Q8NCT3 520 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 OR4C6Q8NH72 309 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 PTPRN2Q92932 1015 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 PAGE5Q96GU1 130 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 MYO19Q96H55 970 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 HIC2Q96JB3 615 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 CCDC114Q96M63 670 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 MMRN2Q9H8L6 949 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 PREBQ9HCU5 417 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 CYTH4Q9UIA0 394 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 TLR6Q9Y2C9 796 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 ASH1LQ9NR48 2969 aaKnown RBP10.24□□□□□ -0.77
NEDD9-210ENST00000505589 NUMA1Q14980 2115 aa10.24□□□□□ -0.77
NEDD9-210ENST00000505589 TTC34A8MYJ7 566 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 C10orf142B7Z368 130 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 CBX4O00257 560 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 ARHGAP6O43182 974 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 PLRG1O43660 514 aaKnown RBP10.23□□□□□ -0.77
NEDD9-210ENST00000505589 KLRC4O43908 158 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 OPA1O60313 960 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 LUC7L3O95232 432 aaKnown RBP10.23□□□□□ -0.77
NEDD9-210ENST00000505589 IGLV3-27P01718 113 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 APOEP02649 317 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 LTFP02788 710 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 PAEPP09466 180 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 SLC2A3P11169 496 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 CASP1P29466 404 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 HNRNPKP61978 463 aaKnown RBP eCLIP10.23□□□□□ -0.77
NEDD9-210ENST00000505589 GABREP78334 506 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 CETN1Q12798 172 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 CNGA2Q16280 664 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 GOLGA7BQ2TAP0 167 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 FAM133BQ5BKY9 247 aaKnown RBP10.23□□□□□ -0.77
NEDD9-210ENST00000505589 MS4A13Q5J8X5 152 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 C1orf220Q5T0J3 134 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 TTC39BQ5VTQ0 682 aaPredicted RBP10.23□□□□□ -0.77
NEDD9-210ENST00000505589 BEND5Q7L4P6 421 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 ZSCAN30Q86W11 494 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 STK40Q8N2I9 435 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 GUF1Q8N442 669 aaKnown RBP10.23□□□□□ -0.77
NEDD9-210ENST00000505589 ARL14Q8N4G2 192 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 FAM181AQ8N9Y4 354 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 GLMNQ92990 594 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 LMLNQ96KR4 655 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 MRGPRX3Q96LB0 322 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 FAM117AQ9C073 453 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.23□□□□□ -0.77
NEDD9-210ENST00000505589 NLGN3Q9NZ94 848 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.23□□□□□ -0.77
NEDD9-210ENST00000505589 ARHGAP20Q9P2F6 1191 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 SERTAD1Q9UHV2 236 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 SLC25A13Q9UJS0 675 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 PCDHA7Q9UN72 937 aa10.23□□□□□ -0.77
NEDD9-210ENST00000505589 HEMK1Q9Y5R4 338 aaPredicted RBP10.23□□□□□ -0.77
NEDD9-210ENST00000505589 SETXQ7Z333 2677 aaKnown RBP10.23□□□□□ -0.77
NEDD9-210ENST00000505589 GOLGA6L7A0A1B0GV03 622 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 H3BM21 787 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 RHOBTB3O94955 611 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 TRIM49P0CI25 452 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 TRIM49CP0CI26 452 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 THEGLP0DJG4 465 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 DGKAP23743 735 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 MZF1P28698 734 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-210ENST00000505589 AKT2P31751 481 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 ACADSBP45954 432 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 CSRP3P50461 194 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 PLK1P53350 603 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 KCNMA1Q12791 1236 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 CUL2Q13617 745 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 EDRF1Q3B7T1 1238 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 ACCSLQ4AC99 568 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 DCAF6Q58WW2 860 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 CDCP2Q5VXM1 449 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 LCLAT1Q6UWP7 414 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 CCDC81Q6ZN84 652 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 KANSL1Q7Z3B3 1105 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms