RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 UCMAQ8WVF2 138 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 ATRIPQ8WXE1 791 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 FAM122AQ96E09 287 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 SIK2Q9H0K1 926 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 CD248Q9HCU0 757 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 MRPL47Q9HD33 250 aaKnown RBP11.59□□□□□ -0.55
ERCC8-208ENST00000497892 PRDM9Q9NQV7 894 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 ZNHIT6Q9NWK9 470 aaKnown RBP11.59□□□□□ -0.55
ERCC8-208ENST00000497892 CACNA2D2Q9NY47 1150 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 THAP10Q9P2Z0 257 aaPredicted RBP11.59□□□□□ -0.55
ERCC8-208ENST00000497892 EBF1Q9UH73 591 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 SNX10Q9Y5X0 201 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 PLXND1Q9Y4D7 1925 aa11.58□□□□□ -0.55
ERCC8-208ENST00000497892 OTOGLQ3ZCN5 2332 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 A0A1W2PQF6 199 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 AKR1B15C9JRZ8 316 aaPredicted RBP11.58□□□□□ -0.56
ERCC8-208ENST00000497892 E9PAM4 449 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 CLDN11O75508 207 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 DESP17661 470 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 IL12RB1P42701 662 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 WASP42768 502 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 PXNP49023 591 aaPredicted RBP11.58□□□□□ -0.56
ERCC8-208ENST00000497892 RPIAP49247 311 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 ADKP55263 362 aaKnown RBP11.58□□□□□ -0.56
ERCC8-208ENST00000497892 NRG1Q02297 640 aaPredicted RBP11.58□□□□□ -0.56
ERCC8-208ENST00000497892 GFPT1Q06210 699 aaPredicted RBP11.58□□□□□ -0.56
ERCC8-208ENST00000497892 ZNF234Q14588 700 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 SLC18A3Q16572 532 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 PTPRNQ16849 979 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 ASTE1Q2TB18 679 aaPredicted RBP11.58□□□□□ -0.56
ERCC8-208ENST00000497892 MANEALQ5VSG8 457 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 MBLAC2Q68D91 279 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 HEATR6Q6AI08 1181 aaKnown RBP11.58□□□□□ -0.56
ERCC8-208ENST00000497892 SDE2Q6IQ49 451 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 ANO7Q6IWH7 933 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 CXorf57Q6NSI4 855 aaKnown RBP11.58□□□□□ -0.56
ERCC8-208ENST00000497892 LRRC31Q6UY01 552 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 WDR5BQ86VZ2 330 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 CCDC185Q8N715 623 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 MDGA1Q8NFP4 955 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 SORCS1Q8WY21 1168 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 TTC17Q96AE7 1141 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 ANP32EQ9BTT0 268 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 TRIM7Q9C029 511 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 THAP2Q9H0W7 228 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 EPC1Q9H2F5 836 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 SEMA4AQ9H3S1 761 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 POLMQ9NP87 494 aaPredicted RBP11.58□□□□□ -0.56
ERCC8-208ENST00000497892 KIAA1522Q9P206 1035 aaPredicted RBP11.58□□□□□ -0.56
ERCC8-208ENST00000497892 INTS6Q9UL03 887 aaKnown RBP11.58□□□□□ -0.56
ERCC8-208ENST00000497892 STON1Q9Y6Q2 735 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 GPR179Q6PRD1 2367 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 SPAG17Q6Q759 2223 aa11.58□□□□□ -0.56
ERCC8-208ENST00000497892 TCRBV21S2A2A0A5A6 115 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 DRGXA6NNA5 263 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 AXIN1O15169 862 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 CNTN5O94779 1100 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 ALDH1A2O94788 518 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 ASLP04424 464 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 DLDP09622 509 aaKnown RBP11.57□□□□□ -0.56
ERCC8-208ENST00000497892 POLR2EP19388 210 aaKnown RBP11.57□□□□□ -0.56
ERCC8-208ENST00000497892 PSMA2P25787 234 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 CNR2P34972 360 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 CSKP41240 450 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 AIF1P55008 147 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 CDH4P55283 916 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 OXCT1P55809 520 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 SLC12A1Q13621 1099 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 PLEKHG6Q3KR16 790 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 MSS51Q4VC12 460 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 ALFQ53S48 1182 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 PITRM1Q5JRX3 1037 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 CCDC122Q5T0U0 273 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 ZNF787Q6DD87 383 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 SERPINA13PQ6UXR4 307 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 TC2NQ8N9U0 490 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 CYB5D2Q8WUJ1 264 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 NKD2Q969F2 451 aaPredicted RBP11.57□□□□□ -0.56
ERCC8-208ENST00000497892 CHP1Q99653 195 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 ZYG11BQ9C0D3 744 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 OSBPL2Q9H1P3 480 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 TMEM245Q9H330 911 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 DEF6Q9H4E7 631 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 MYO1AQ9UBC5 1043 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 PPARGC1AQ9UBK2 798 aaKnown RBP11.57□□□□□ -0.56
ERCC8-208ENST00000497892 ZNF212Q9UDV6 495 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 OR12D3Q9UGF7 316 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 NEU3Q9UQ49 428 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 TBC1D30Q9Y2I9 924 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 CHD5Q8TDI0 1954 aa11.57□□□□□ -0.56
ERCC8-208ENST00000497892 RIF1Q5UIP0 2472 aaKnown RBP11.57□□□□□ -0.56
ERCC8-208ENST00000497892 GVINP1Q7Z2Y8 2422 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.56□□□□□ -0.56
ERCC8-208ENST00000497892 FAM187AA6NFU0 413 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 WASH3PC4AMC7 463 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 MOCS3O95396 460 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 CYP1A2P05177 515 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 ATP5BP06576 529 aaKnown RBP11.56□□□□□ -0.56
ERCC8-208ENST00000497892 GABRG2P18507 467 aa11.56□□□□□ -0.56
ERCC8-208ENST00000497892 PRKCHP24723 683 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms