RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 HOXD9P28356 352 aaPredicted RBP4.15□□□□□ -1.75
CLK1-214ENST00000496205 AVPR2P30518 371 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 AGTR2P50052 363 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 RCAN1P53805 252 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 TXNL4AP83876 142 aaKnown RBP4.15□□□□□ -1.75
CLK1-214ENST00000496205 DDX10Q13206 875 aaKnown RBP4.15□□□□□ -1.75
CLK1-214ENST00000496205 TRPC3Q13507 836 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 TWIST1Q15672 202 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 GPATCH4Q5T3I0 446 aaKnown RBP4.15□□□□□ -1.75
CLK1-214ENST00000496205 UBAP2Q5T6F2 1119 aaKnown RBP4.15□□□□□ -1.75
CLK1-214ENST00000496205 CLEC4GQ6UXB4 293 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 BCDIN3DQ7Z5W3 292 aaKnown RBP4.15□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D1Q86TI0 1168 aaPredicted RBP4.15□□□□□ -1.75
CLK1-214ENST00000496205 PPHLN1Q8NEY8 458 aaKnown RBP4.15□□□□□ -1.75
CLK1-214ENST00000496205 OR52L2PQ8NGH6 319 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 MAFAQ8NHW3 353 aaPredicted RBP4.15□□□□□ -1.75
CLK1-214ENST00000496205 GLMPQ8WWB7 406 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 ARRDC3Q96B67 414 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 SKA1Q96BD8 255 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 HVCN1Q96D96 273 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 ZBTB10Q96DT7 871 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 RBM17Q96I25 401 aaKnown RBP4.15□□□□□ -1.75
CLK1-214ENST00000496205 FAR2Q96K12 515 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 SENP7Q9BQF6 1050 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 SLC26A6Q9BXS9 759 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 CLPBQ9H078 707 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 SEMA5BQ9P283 1151 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 PI4KBQ9UBF8 816 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 FZD4Q9ULV1 537 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D3DA0A087WVF3 549 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D3IA0A087WXS9 549 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D3EA0A087X179 549 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D3KA0A087X1G2 549 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D3BA6NDS4 549 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D3FA6NER0 549 aaPredicted RBP4.14□□□□□ -1.75
CLK1-214ENST00000496205 CD8B2A6NJW9 211 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D3LB9A6J9 549 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 FYB1O15117 783 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 HSP90AA1P07900 732 aaKnown RBP4.14□□□□□ -1.75
CLK1-214ENST00000496205 NPSP0C0P6 89 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 TMEM191BP0C7N4 346 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D3HP0C7X1 549 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 CHN1P15882 459 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 IGFBP2P18065 325 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 SCP2P22307 547 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 MMP8P22894 467 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 GRK5P34947 590 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 STAT6P42226 847 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 JAK3P52333 1124 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 COPB1P53618 953 aaKnown RBP4.14□□□□□ -1.75
CLK1-214ENST00000496205 TLE3Q04726 772 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 CCDC15Q0P6D6 951 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 ERV3-1Q14264 604 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 CTXN3Q4LDR2 81 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 ZNF569Q5MCW4 686 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D3GQ6DHY5 549 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D3CQ6IPX1 549 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 SFTPA1Q8IWL2 248 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 ADGRF3Q8IZF5 1079 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 TBC1D3Q8IZP1 549 aaPredicted RBP4.14□□□□□ -1.75
CLK1-214ENST00000496205 C12orf76Q8N812 135 aaPredicted RBP4.14□□□□□ -1.75
CLK1-214ENST00000496205 PTGR2Q8N8N7 351 aaPredicted RBP4.14□□□□□ -1.75
CLK1-214ENST00000496205 EXD3Q8N9H8 876 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 PCYOX1LQ8NBM8 494 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 ABHD11Q8NFV4 315 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 ST8SIA4Q92187 359 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 STAMQ92783 540 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 CIPCQ9C0C6 399 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 TTYH1Q9H313 450 aaPredicted RBP4.14□□□□□ -1.75
CLK1-214ENST00000496205 SMC4Q9NTJ3 1288 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 B3GNT3Q9Y2A9 372 aa4.14□□□□□ -1.75
CLK1-214ENST00000496205 COPG1Q9Y678 874 aaKnown RBP4.14□□□□□ -1.75
CLK1-214ENST00000496205 LMTK3Q96Q04 1460 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 CYP3A7-CYP3A51PA0A087WV96 503 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 NPIPB13A6NJU9 1138 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 NPIPB5A8MRT5 1133 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 PRSS47A8MTI9 375 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 C17orf100A8MU93 164 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 B4E171 279 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 NPIPB4C9JG80 1138 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 POC1B-GALNT4F8VUJ3 575 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 H7C1Q1 480 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 GTPBP1O00178 669 aaKnown RBP4.13□□□□□ -1.75
CLK1-214ENST00000496205 DHX16O60231 1041 aaKnown RBP4.13□□□□□ -1.75
CLK1-214ENST00000496205 DLDP09622 509 aaKnown RBP4.13□□□□□ -1.75
CLK1-214ENST00000496205 MYCLP12524 364 aaPredicted RBP4.13□□□□□ -1.75
CLK1-214ENST00000496205 CYP3A7P24462 503 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 NDUFS1P28331 727 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 TSPAN7P41732 249 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 RXRGP48443 463 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 HTR6P50406 440 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 SLC37A1P57057 533 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 WDR5P61964 334 aaKnown RBP4.13□□□□□ -1.75
CLK1-214ENST00000496205 SHC2P98077 582 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 B4GALNT1Q00973 533 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 GALNT2Q10471 571 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 TDGQ13569 410 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 TBRG1Q3YBR2 411 aa4.13□□□□□ -1.75
CLK1-214ENST00000496205 C10orf25Q5T742 122 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms