RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 LNX1Q8TBB1 728 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-219ENST00000494323 PIGOQ8TEQ8 1089 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 GAB3Q8WWW8 586 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 ATRIPQ8WXE1 791 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 ING5Q8WYH8 240 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 FGF13Q92913 245 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 MCRS1Q96EZ8 462 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 NUDT11Q96G61 164 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 ZNF274Q96GC6 653 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-219ENST00000494323 LRGUKQ96M69 825 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 HSD17B14Q9BPX1 270 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 KXD1Q9BQD3 176 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 EIF2AK1Q9BQI3 630 aaKnown RBP5.65□□□□□ -1.5
PTCD3-219ENST00000494323 TTPALQ9BTX7 342 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 PLA2G2FQ9BZM2 168 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 SLC2A4RGQ9NR83 387 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.65□□□□□ -1.5
PTCD3-219ENST00000494323 POLR3BQ9NW08 1133 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-219ENST00000494323 HCFC1R1Q9NWW0 138 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 ZDHHC7Q9NXF8 308 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 DNMT3BQ9UBC3 853 aaKnown RBP5.65□□□□□ -1.5
PTCD3-219ENST00000494323 CDH7Q9ULB5 785 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 USP18Q9UMW8 372 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 PCDHA12Q9UN75 941 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 CYP46A1Q9Y6A2 500 aa5.65□□□□□ -1.5
PTCD3-219ENST00000494323 FANCMQ8IYD8 2048 aa5.65□□□□□ -1.51
PTCD3-219ENST00000494323 NID2Q14112 1375 aa5.65□□□□□ -1.51
PTCD3-219ENST00000494323 MYH15Q9Y2K3 1946 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 CNOT1A5YKK6 2376 aaKnown RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 LRRIQ4A6NIV6 560 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 TBX3O15119 743 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 TPD52L2O43399 206 aaKnown RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 LAMTOR5O43504 91 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 KINO60870 393 aaKnown RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 NRG3P56975 720 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 SESN2P58004 480 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 POU5F1BQ06416 359 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 ZNF267Q14586 743 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 MLF2Q15773 248 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 PSMD5Q16401 504 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 MAN2A1Q16706 1144 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 LIN9Q5TKA1 542 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 MBNL2Q5VZF2 373 aaKnown RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 SLC27A1Q6PCB7 646 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 CPLX2Q6PUV4 134 aaKnown RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 CENPQQ7L2Z9 268 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 HACE1Q8IYU2 909 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 KLHL36Q8N4N3 616 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 SLC35G2Q8TBE7 412 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 ADAMTS17Q8TE56 1095 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 CCDC51Q96ER9 411 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 AJUBAQ96IF1 538 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 GTPBP4Q9BZE4 634 aaKnown RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 OSBPL6Q9BZF3 934 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 ZNF700Q9H0M5 742 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 XYLT2Q9H1B5 865 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 POLR3FQ9H1D9 316 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 TTC12Q9H892 705 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 BARX1Q9HBU1 254 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 HEBP1Q9NRV9 189 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 PDRG1Q9NUG6 133 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 DLL3Q9NYJ7 618 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 GDAQ9Y2T3 454 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 VWA7Q9Y334 891 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 ZFP37Q9Y6Q3 630 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-219ENST00000494323 MIA3Q5JRA6 1907 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 DNAH14Q0VDD8 3507 aa5.64□□□□□ -1.51
PTCD3-219ENST00000494323 A0A1B0GTL3 188 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 OTOL1A6NHN0 477 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-219ENST00000494323 A6NNZ2 444 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 I3L4J1 428 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 PTGESO14684 152 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 USO1O60763 962 aaKnown RBP5.63□□□□□ -1.51
PTCD3-219ENST00000494323 REC8O95072 547 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 CTDNEP1O95476 244 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 C1RP00736 705 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 THP07101 528 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 POU2F2P09086 479 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 HNRNPA1P09651 372 aaKnown RBP eCLIP5.63□□□□□ -1.51
PTCD3-219ENST00000494323 GCFC2P16383 781 aaKnown RBP5.63□□□□□ -1.51
PTCD3-219ENST00000494323 RARRES1P49788 294 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 ATXN1P54253 815 aaKnown RBP5.63□□□□□ -1.51
PTCD3-219ENST00000494323 ARPP19P56211 112 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 GRIK3Q13003 919 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 CALCRLQ16602 461 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 LPAL2Q16609 132 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 ANO4Q32M45 955 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 PABPC1LQ4VXU2 614 aaKnown RBP5.63□□□□□ -1.51
PTCD3-219ENST00000494323 GLRA4Q5JXX5 417 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 SYCP2LQ5T4T6 812 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 TANGO2Q6ICL3 276 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 GLB1L2Q8IW92 636 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 GPR65Q8IYL9 337 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 BCL6BQ8N143 479 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-219ENST00000494323 TXNDC5Q8NBS9 432 aaKnown RBP5.63□□□□□ -1.51
PTCD3-219ENST00000494323 SVIPQ8NHG7 77 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 HPS3Q969F9 1004 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 CCDC43Q96MW1 224 aaKnown RBP5.63□□□□□ -1.51
PTCD3-219ENST00000494323 WDR92Q96MX6 357 aa5.63□□□□□ -1.51
PTCD3-219ENST00000494323 SPATA25Q9BR10 227 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms