RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 HOXA10P31260 410 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-207ENST00000494090 SLC44A4Q53GD3 710 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 IRAK1BP1Q5VVH5 260 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 USP50Q70EL3 339 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-207ENST00000494090 STK40Q8N2I9 435 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 UROC1Q96N76 676 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 FAM220BPB1ANY3 271 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 VAPBO95292 243 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 FSCN1Q16658 493 aaKnown RBP19.5■□□□□ 0.71
COL27A1-207ENST00000494090 FAM98BQ52LJ0 330 aaKnown RBP19.5■□□□□ 0.71
COL27A1-207ENST00000494090 RNF43Q68DV7 783 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 DUPD1Q68J44 220 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 ZNF470Q6ECI4 717 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 TRMT11Q7Z4G4 463 aaKnown RBP19.5■□□□□ 0.71
COL27A1-207ENST00000494090 ALLCQ8N6M5 410 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 POPDC2Q9HBU9 364 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 STMN3Q9NZ72 180 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 SORCS3Q9UPU3 1222 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 H3BMM5 538 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 C4BPBP20851 252 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 CCT8P50990 548 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 INHBEP58166 350 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 ATXN3LQ9H3M9 355 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 AP3M1Q9Y2T2 418 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 WNT10BO00744 389 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 ZNF682O95780 498 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 C1DQ13901 141 aaKnown RBP19.49■□□□□ 0.71
COL27A1-207ENST00000494090 PPM1LQ5SGD2 360 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 DEFB132Q7Z7B7 95 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 POU5F2Q8N7G0 328 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 PRELID2Q8N945 189 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 GLMNQ92990 594 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 ZBTB10Q96DT7 871 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 P2RX7Q99572 595 aaKnown RBP19.49■□□□□ 0.71
COL27A1-207ENST00000494090 UNKQ9C0B0 810 aaKnown RBP19.49■□□□□ 0.71
COL27A1-207ENST00000494090 RAD21L1Q9H4I0 556 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 RABGEF1Q9UJ41 708 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 ATRNO75882 1429 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 STAU1O95793 577 aaKnown RBP19.49■□□□□ 0.71
COL27A1-207ENST00000494090 YBX3P16989 372 aaKnown RBP eCLIP19.49■□□□□ 0.71
COL27A1-207ENST00000494090 BMT2Q1RMZ1 405 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 TRAPPC12Q8WVT3 735 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 SHC3Q92529 594 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 APBA2Q99767 749 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 PIH1D1Q9NWS0 290 aaKnown RBP19.49■□□□□ 0.71
COL27A1-207ENST00000494090 UBA2Q9UBT2 640 aaPredicted RBP19.49■□□□□ 0.71
COL27A1-207ENST00000494090 ADAM30Q9UKF2 790 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 PDZK1P1A8MUH7 402 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 KCNK1O00180 336 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 MRASO14807 208 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 MYBL2P10244 700 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 SLC2A4P14672 509 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 OR6Y1Q8NGX8 325 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 SERAC1Q96JX3 654 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 TRAPPC9Q96Q05 1148 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 BDH2Q9BUT1 245 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 PAPOLBQ9NRJ5 636 aaKnown RBP19.49■□□□□ 0.71
COL27A1-207ENST00000494090 TIMM13Q9Y5L4 95 aaPredicted RBP19.49■□□□□ 0.71
COL27A1-207ENST00000494090 CCNT2O60583 730 aaKnown RBP19.49■□□□□ 0.71
COL27A1-207ENST00000494090 PBX1P40424 430 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 BCL2L1Q07817 233 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 MSLNQ13421 630 aaPredicted RBP19.49■□□□□ 0.71
COL27A1-207ENST00000494090 FAM45BPQ6NSW5 357 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 IRGCQ6NXR0 463 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 ZCCHC23Q6ZST2 131 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 SYTL1Q8IYJ3 562 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 NSMCE2Q96MF7 247 aa19.49■□□□□ 0.71
COL27A1-207ENST00000494090 A0A087X1B8 175 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 SLC9A3R1O14745 358 aaPredicted RBP19.48■□□□□ 0.71
COL27A1-207ENST00000494090 KATNA1O75449 491 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 CREMQ03060 361 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 TRAF2Q12933 501 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 PWP1Q13610 501 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 CES3Q6UWW8 571 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 DPP10Q8N608 796 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 ZFRQ96KR1 1074 aaKnown RBP19.48■□□□□ 0.71
COL27A1-207ENST00000494090 ABCC13Q9NSE7 274 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 ASTN2O75129 1339 aaPredicted RBP19.48■□□□□ 0.71
COL27A1-207ENST00000494090 FGF10O15520 208 aaPredicted RBP19.48■□□□□ 0.71
COL27A1-207ENST00000494090 TNFAIP8O95379 198 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 MT-CO1P00395 513 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 HIRAP54198 1017 aaPredicted RBP19.48■□□□□ 0.71
COL27A1-207ENST00000494090 ARHGAP17Q68EM7 881 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 SNX32Q86XE0 403 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 TMEM161BQ8NDZ6 487 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 A1CFQ9NQ94 594 aaKnown RBP19.48■□□□□ 0.71
COL27A1-207ENST00000494090 GEMIN8Q9NWZ8 242 aaKnown RBP19.48■□□□□ 0.71
COL27A1-207ENST00000494090 TRPC4Q9UBN4 977 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 UBIAD1Q9Y5Z9 338 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 A0A088AWK7 358 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 CLTBP09497 229 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 PABPC1P11940 636 aaKnown RBP19.48■□□□□ 0.71
COL27A1-207ENST00000494090 ZNF10P21506 573 aaPredicted RBP19.48■□□□□ 0.71
COL27A1-207ENST00000494090 JAK1P23458 1154 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 GTF2E2P29084 291 aaKnown RBP19.48■□□□□ 0.71
COL27A1-207ENST00000494090 FMO1Q01740 532 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 MAGEC3Q8TD91 643 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 SPG21Q9NZD8 308 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 KLHL20Q9Y2M5 609 aa19.48■□□□□ 0.71
COL27A1-207ENST00000494090 C15orf38-AP3S2A0A0A6YYH1 394 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms