RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 MAN1A1P33908 653 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 CTNNA1P35221 906 aaKnown RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 MATKP42679 507 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 SLC1A1P43005 524 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 PTPN9P43378 593 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 TUFMP49411 452 aaKnown RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 DNA2P51530 1060 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 SLC8A3P57103 927 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 SNX16P57768 344 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 RBM10P98175 930 aaKnown RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 RING1Q06587 406 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 TWF1Q12792 350 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 IFRD2Q12894 506 aaPredicted RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 TAF10Q12962 218 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 KCNC3Q14003 757 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 PIGHQ14442 188 aaPredicted RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 SMC1AQ14683 1233 aaKnown RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 LRRC14Q15048 493 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 RAB30Q15771 203 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 IFI16Q16666 785 aaKnown RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 EFHC1Q5JVL4 640 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 BSPRYQ5W0U4 402 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 AADACL2Q6P093 401 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 CC2D1AQ6P1N0 951 aaPredicted RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 DENND5BQ6ZUT9 1274 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 BEND5Q7L4P6 421 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 PEX26Q7Z412 305 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 UBE3DQ7Z6J8 389 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 TMEM150AQ86TG1 271 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 CREG2Q8IUH2 290 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 ZDHHC14Q8IZN3 488 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 FAM181AQ8N9Y4 354 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 MSANTD4Q8NCY6 345 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 LRRN4CLQ8ND94 238 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 VN1R2Q8NFZ6 395 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 KIF18AQ8NI77 898 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 ARNTL2Q8WYA1 636 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 IRGQQ8WZA9 623 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 ACSF2Q96CM8 615 aaPredicted RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 MS4A14Q96JA4 679 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 FRMD6Q96NE9 622 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 SAMD11Q96NU1 681 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 ALS2CR12Q96Q35 445 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 OSBPL9Q96SU4 736 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 TBCBQ99426 244 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 NPY6RQ99463 290 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 HERPUD2Q9BSE4 406 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 CNPY3Q9BT09 278 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 DUSP23Q9BVJ7 150 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 LRRC3Q9BY71 257 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 MAGEB5Q9BZ81 275 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 L2HGDHQ9H9P8 463 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 POPDC2Q9HBU9 364 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 ZNF334Q9HCZ1 680 aaPredicted RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 WDR6Q9NNW5 1121 aaKnown RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 SSU72Q9NP77 194 aaKnown RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 NGRNQ9NPE2 291 aaKnown RBP5.06□□□□□ -1.6
EPCAM-206ENST00000490733 ANLNQ9NQW6 1124 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 ENTPD7Q9NQZ7 604 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 SMARCAL1Q9NZC9 954 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 EHD2Q9NZN4 543 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 GMIPQ9P107 970 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 IP6K2Q9UHH9 426 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 ADGRE2Q9UHX3 823 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 NUDT5Q9UKK9 219 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 AMFRQ9UKV5 643 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 CYP8B1Q9UNU6 501 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 SSX2IPQ9Y2D8 614 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 PCDHA3Q9Y5H8 950 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 INSL5Q9Y5Q6 135 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 DOCK8Q8NF50 2099 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 MYOFQ9NZM1 2061 aa5.06□□□□□ -1.6
EPCAM-206ENST00000490733 COL6A3P12111 3177 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 ZNF840PA6NDX5 716 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 C3orf70A6NLC5 250 aaPredicted RBP5.05□□□□□ -1.6
EPCAM-206ENST00000490733 KCNK3O14649 394 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 PRRG1O14668 218 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 SPOPO43791 374 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 RFPL2O75678 378 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 URI1O94763 535 aaPredicted RBP5.05□□□□□ -1.6
EPCAM-206ENST00000490733 RTN3O95197 1032 aaPredicted RBP5.05□□□□□ -1.6
EPCAM-206ENST00000490733 PAPLNO95428 1278 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 TRUB2O95900 331 aaKnown RBP5.05□□□□□ -1.6
EPCAM-206ENST00000490733 TBX18O95935 607 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 GLUD1P00367 558 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 C8AP07357 584 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 CD48P09326 243 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 PYGMP11217 842 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 NCAM1P13591 858 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 EPCAMP16422 314 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 PRLRP16471 622 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 KLRC2P26717 231 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 SDC4P31431 198 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 CA8P35219 290 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 GTF2F1P35269 517 aaKnown RBP eCLIP5.05□□□□□ -1.6
EPCAM-206ENST00000490733 PCK1P35558 622 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 ARSEP51690 589 aa5.05□□□□□ -1.6
EPCAM-206ENST00000490733 YWHAGP61981 247 aaKnown RBP eCLIP5.05□□□□□ -1.6
EPCAM-206ENST00000490733 RPL10AP62906 217 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms