RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 SPATA20Q8TB22 786 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 AFG1LQ8WV93 481 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 TMEM186Q96B77 213 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 TBC1D32Q96NH3 1257 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 TRIM31Q9BZY9 425 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 RRAGDQ9NQL2 400 aaPredicted RBP3.15□□□□□ -1.91
UBXN4-208ENST00000490163 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.15□□□□□ -1.91
UBXN4-208ENST00000490163 FAM184BQ9ULE4 1060 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 ANGEL1Q9UNK9 670 aaKnown RBP3.15□□□□□ -1.91
UBXN4-208ENST00000490163 HPSEQ9Y251 543 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 LOC100509620A0A075B734 347 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 A0A1B0GVM2 712 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 B5MCH6 92 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 FAM229AH3BQW9 127 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 STX16-NPEPL1H3BU86 382 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 STX16O14662 325 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 HOXA3O43365 443 aaPredicted RBP3.15□□□□□ -1.91
UBXN4-208ENST00000490163 SPRY2O43597 315 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 GAS2O43903 313 aaKnown RBP3.15□□□□□ -1.91
UBXN4-208ENST00000490163 PSPNO60542 156 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 UQCRC1P31930 480 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 GP5P40197 560 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 GATA4P43694 442 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 CPA2P48052 419 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 BLKP51451 505 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 ITGA1P56199 1179 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 SNX16P57768 344 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 PRR5P85299 388 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 ADORA2A-AS1P86434 159 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 NWD1Q149M9 1564 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 NFKBIBQ15653 356 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 GPR139Q6DWJ6 353 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 VASNQ6EMK4 673 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 CD109Q6YHK3 1445 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 LRRC56Q8IYG6 542 aaPredicted RBP3.15□□□□□ -1.91
UBXN4-208ENST00000490163 GIMAP1Q8WWP7 306 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 SECISBP2LQ93073 1101 aaKnown RBP3.15□□□□□ -1.91
UBXN4-208ENST00000490163 RAB3IPQ96QF0 476 aaPredicted RBP3.15□□□□□ -1.91
UBXN4-208ENST00000490163 IMPG2Q9BZV3 1241 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 ASAH2Q9NR71 780 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 HSFX1Q9UBD0 423 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 SIT1Q9Y3P8 196 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 ZC3H12DA2A288 527 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 C9orf118A6NHY6 69 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 ZBTB14O43829 449 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 VIPP01282 170 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 ATF2P15336 505 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 UBXN2AP68543 259 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 PTH1RQ03431 593 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 ACTN3Q08043 901 aaPredicted RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 SLC12A1Q13621 1099 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CCDC142Q17RM4 750 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 ZXDCQ2QGD7 858 aaPredicted RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 NOTUMQ6P988 496 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 SLC27A1Q6PCB7 646 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 LARP4Q71RC2 724 aaKnown RBP eCLIP3.14□□□□□ -1.911e-9■□□□□ 8.8
UBXN4-208ENST00000490163 NEK8Q86SG6 692 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 C16orf71Q8IYS4 520 aaPredicted RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 FSIP1Q8NA03 581 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 MOSPD2Q8NHP6 518 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CSGALNACT1Q8TDX6 532 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CPT1BQ92523 772 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 ANP32BQ92688 251 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 WDYHV1Q96HA8 205 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 PTDSS2Q9BVG9 487 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 KRTAP4-8Q9BYQ9 185 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 HOXC10Q9NYD6 342 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CHST2Q9Y4C5 530 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CAPN7Q9Y6W3 813 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 IGSF1Q8N6C5 1336 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 A0A1B0GWJ7 208 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 HMX2A2RU54 273 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 RTCAO00442 366 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 MITFO75030 526 aaPredicted RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 FKTNO75072 461 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 SNRPA1P09661 255 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 GMPSP49915 693 aaPredicted RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 RARSP54136 660 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CYP4A11Q02928 519 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 YWHAHQ04917 246 aaPredicted RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 GRIK4Q16099 956 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 SUSD1Q6UWL2 747 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 ZNF605Q86T29 641 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CEP57Q86XR8 500 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 CCDC150Q8NCX0 1101 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 DENND6BQ8NEG7 585 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 UCMAQ8WVF2 138 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 ZNF622Q969S3 477 aaKnown RBP eCLIP3.14□□□□□ -1.914e-7■■■■□ 22.7
UBXN4-208ENST00000490163 CENPTQ96BT3 561 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 ABHD6Q9BV23 337 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 SLC25A32Q9H2D1 315 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 PPIL3Q9H2H8 161 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 SEPSECSQ9HD40 501 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 ADPRHL2Q9NX46 363 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 INTS6Q9UL03 887 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 ZMYM3Q14202 1370 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 XRN1Q8IZH2 1706 aaKnown RBP3.14□□□□□ -1.91
UBXN4-208ENST00000490163 SETBP1Q9Y6X0 1596 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 TOPAZ1Q8N9V7 1692 aa3.14□□□□□ -1.91
UBXN4-208ENST00000490163 SALL3Q9BXA9 1300 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms