RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 TRAPPC3O43617 180 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 PARNO95453 639 aaKnown RBP6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CHRNA1P02708 482 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CELA3AP09093 270 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 FAM200BP0CF97 657 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 RBP3P10745 1247 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 KRT10P13645 584 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 TYMPP19971 482 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 AKAP5P24588 427 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 IL1R2P27930 398 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 LSP1P33241 339 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 MAP2K2P36507 400 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 ARL4AP40617 200 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 MAGEA4P43358 317 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 MMP13P45452 471 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CLCN7P51798 805 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CDH6P55285 790 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 BCAR1P56945 870 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 EIF3EP60228 445 aaKnown RBP6.86□□□□□ -1.31
PDCD4-209ENST00000489049 YWHAZP63104 245 aaKnown RBP6.86□□□□□ -1.31
PDCD4-209ENST00000489049 GNGT1P63211 74 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 FAM189BP81408 668 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 SARNPP82979 210 aaKnown RBP6.86□□□□□ -1.31
PDCD4-209ENST00000489049 ROR1Q01973 937 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CACNB2Q08289 660 aaPredicted RBP6.86□□□□□ -1.31
PDCD4-209ENST00000489049 GPS1Q13098 491 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 DPYSL3Q14195 570 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 NOMO1Q15155 1222 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 KCNA10Q16322 511 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 PTGISQ16647 500 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CCDC142Q17RM4 750 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CCDC14Q49A88 953 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 RNASEH2BQ5TBB1 312 aaKnown RBP6.86□□□□□ -1.31
PDCD4-209ENST00000489049 ZBTB37Q5TC79 503 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 ARMC3Q5W041 872 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 KAZNQ674X7 775 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CCSAPQ6IQ19 270 aaPredicted RBP6.86□□□□□ -1.31
PDCD4-209ENST00000489049 LLGL2Q6P1M3 1020 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CXCL17Q6UXB2 119 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 DSTYKQ6XUX3 929 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 TADA2BQ86TJ2 420 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 C12orf40Q86WS4 652 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CPNE8Q86YQ8 564 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 SIX6OS1Q8N1H7 587 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 THEM5Q8N1Q8 247 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 C12orf29Q8N999 325 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 ATP11CQ8NB49 1132 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 MCUQ8NE86 351 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 MYCBPAPQ8TBZ2 947 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 FAM172AQ8WUF8 416 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 RIN2Q8WYP3 895 aaPredicted RBP6.86□□□□□ -1.31
PDCD4-209ENST00000489049 TRIB2Q92519 343 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 NTAN1Q96AB6 310 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 PGAP3Q96FM1 320 aaPredicted RBP6.86□□□□□ -1.31
PDCD4-209ENST00000489049 SENP8Q96LD8 212 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 FRMD6Q96NE9 622 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 PPP1R2P1Q96PQ5 205 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 SLC2A13Q96QE2 648 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 ACBD6Q9BR61 282 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 APOL6Q9BWW8 343 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CALN1Q9BXU9 219 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 EPB41L4BQ9H329 900 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CENPHQ9H3R5 247 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 CCDC134Q9H6E4 229 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 ZWILCHQ9H900 591 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 LRRC4Q9HBW1 653 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.86□□□□□ -1.31
PDCD4-209ENST00000489049 DONSONQ9NYP3 566 aa6.86□□□□□ -1.31
PDCD4-209ENST00000489049 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.86□□□□□ -1.31
PDCD4-209ENST00000489049 PDCD11Q14690 1871 aaKnown RBP6.85□□□□□ -1.31
PDCD4-209ENST00000489049 GMNCA6NCL1 334 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 ARL5CA6NH57 179 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 E7ESA3 106 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 TMEM189-UBE2V1I3L0A0 370 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 M0QZQ0 153 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 AP3B1O00203 1094 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 PTGESO14684 152 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 TRDMT1O14717 391 aaKnown RBP6.85□□□□□ -1.31
PDCD4-209ENST00000489049 GCATO75600 419 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 FAM107AO95990 144 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 ASGR1P07306 291 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 PDGFRBP09619 1106 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 GJC1P36383 396 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 THPOP40225 353 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 MAGOHP61326 146 aaKnown RBP6.85□□□□□ -1.31
PDCD4-209ENST00000489049 MRPS5P82675 430 aaKnown RBP6.85□□□□□ -1.31
PDCD4-209ENST00000489049 ZNF200P98182 395 aaPredicted RBP6.85□□□□□ -1.31
PDCD4-209ENST00000489049 TSPY1Q01534 308 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 OTUD4Q01804 1114 aaKnown RBP6.85□□□□□ -1.31
PDCD4-209ENST00000489049 ZNF33AQ06730 810 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 SCAPQ12770 1279 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 SMARCB1Q12824 385 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 TUSC3Q13454 348 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 ITGA7Q13683 1181 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 AUHQ13825 339 aaKnown RBP6.85□□□□□ -1.31
PDCD4-209ENST00000489049 KCNMB1Q16558 191 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 KLHL38Q2WGJ6 581 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 ARL13BQ3SXY8 428 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 ATP13A4Q4VNC1 1196 aa6.85□□□□□ -1.31
PDCD4-209ENST00000489049 ANKRD20A8PQ5CZ79 823 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms