RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 TAF1LQ8IZX4 1826 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 TNRC6CQ9HCJ0 1690 aaKnown RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 VWA3AA6NCI4 1184 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 MANSC4A6NHS7 340 aaPredicted RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 MYO1FO00160 1098 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 BTN3A1O00481 513 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 MPHOSPH10O00566 681 aaKnown RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 TBX3O15119 743 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 POLR2DO15514 142 aaKnown RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 PHGDHO43175 533 aaKnown RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 TLR5O60602 858 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 NXPH3O95157 252 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 THP07101 528 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 HNRNPCP07910 306 aaKnown RBP eCLIP3.14□□□□□ -1.91
CALD1-221ENST00000489019 PARP1P09874 1014 aaKnown RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 NHLRC4P0CG21 123 aaPredicted RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 GOLGA8HP0CJ92 632 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 IL1R1P14778 569 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 SERPINB3P29508 390 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 ALDH1B1P30837 517 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 TRAPPC10P48553 1259 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 RBM5P52756 815 aaKnown RBP eCLIP3.14□□□□□ -1.91
CALD1-221ENST00000489019 ATXN1P54253 815 aaKnown RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 TERF1P54274 439 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 NAPAP54920 295 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 SOX10P56693 466 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 UBASH3AP57075 661 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 GSDMDP57764 484 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 MYO1EQ12965 1108 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 SLC13A2Q13183 592 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 MORC3Q14149 939 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 GRM4Q14833 912 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 POSTNQ15063 836 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 LLGL1Q15334 1064 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 PFKFB3Q16875 520 aaPredicted RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 DPCR1Q3MIW9 517 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 INO80DQ53TQ3 878 aaPredicted RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 PLAC9Q5JTB6 97 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 ZNF772Q68DY9 489 aaPredicted RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 FCRLBQ6BAA4 426 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 SARM1Q6SZW1 724 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 C15orf52Q6ZUT6 534 aaKnown RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 CREBRFQ8IUR6 639 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 DHX40Q8IX18 779 aaKnown RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 KIAA0319LQ8IZA0 1049 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 BLIDQ8IZY5 108 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 C17orf53Q8N3J3 647 aaPredicted RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 MYRIPQ8NFW9 859 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 TBC1D16Q8TBP0 767 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 CCDC12Q8WUD4 166 aaPredicted RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 PPM1EQ8WY54 764 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 ANKS1AQ92625 1134 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 GLG1Q92896 1179 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 REPS1Q96D71 796 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 RRP36Q96EU6 259 aaKnown RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 BPIFA3Q9BQP9 254 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 PYM1Q9BRP8 204 aaKnown RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 COA1Q9GZY4 146 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 TMEM60Q9H2L4 133 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 VAT1LQ9HCJ6 419 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 C6orf50Q9HD87 102 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 SH3GLB2Q9NR46 395 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 STK32BQ9NY57 414 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 DLL3Q9NYJ7 618 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 IFNKQ9P0W0 207 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 POLLQ9UGP5 575 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 NRBP1Q9UHY1 535 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 FBXO2Q9UK22 296 aaPredicted RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 PYCARDQ9ULZ3 195 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 SHOC2Q9UQ13 582 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 HPSEQ9Y251 543 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 TBC1D30Q9Y2I9 924 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.14□□□□□ -1.91
CALD1-221ENST00000489019 SRPRBQ9Y5M8 271 aaKnown RBP3.14□□□□□ -1.91
CALD1-221ENST00000489019 WNT6Q9Y6F9 365 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 SBF2Q86WG5 1849 aa3.14□□□□□ -1.91
CALD1-221ENST00000489019 BAZ2AQ9UIF9 1905 aaKnown RBP3.13□□□□□ -1.91
CALD1-221ENST00000489019 DLEC1Q9Y238 1755 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 GPR75-ASB3A0A0A6YYF3 556 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 A1L4Q6 167 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 SMCO2A6NFE2 343 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 TARM1B6A8C7 271 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 KLRF2D3W0D1 207 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 FAM227AF5H4B4 570 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 H0YIN7 160 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 MYO1CO00159 1063 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 IKBKBO14920 756 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 PMM2O15305 246 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 SLC16A3O15427 465 aaKnown RBP3.13□□□□□ -1.91
CALD1-221ENST00000489019 CCP110O43303 1012 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 TCEA3O75764 348 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 MMP10P09238 476 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 FAM163BP0C2L3 166 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 TOP1P11387 765 aaKnown RBP3.13□□□□□ -1.91
CALD1-221ENST00000489019 SKILP12757 684 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 TNNT1P13805 278 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 NDUFB7P17568 137 aa3.13□□□□□ -1.91
CALD1-221ENST00000489019 EN2P19622 333 aaPredicted RBP3.13□□□□□ -1.91
CALD1-221ENST00000489019 SFPQP23246 707 aaKnown RBP eCLIP3.13□□□□□ -1.91
CALD1-221ENST00000489019 ADORA2AP29274 412 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms