RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 ATAD1Q8NBU5 361 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 TMEM161BQ8NDZ6 487 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 SH3RF2Q8TEC5 729 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 ZFYVE19Q96K21 471 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 TCHPQ9BT92 498 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 SLC46A2Q9BY10 475 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 CCSER1Q9C0I3 900 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 OSBPL2Q9H1P3 480 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 SLITRK6Q9H5Y7 841 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 KIF9Q9HAQ2 790 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 HPS4Q9NQG7 708 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 KMT5AQ9NQR1 393 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 THG1LQ9NWX6 298 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 LRWD1Q9UFC0 647 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 TUBGCP4Q9UGJ1 667 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 DSEQ9UL01 958 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 TBX20Q9UMR3 447 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 ITPR1Q14643 2758 aa5.49□□□□□ -1.53
R3HDM1-218ENST00000487294 DENND4CQ5VZ89 1909 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 AKAP13Q12802 2813 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 LNP1A1A4G5 178 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 ANO9A1A5B4 782 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 H0YCG3 227 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 PIRO00625 290 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 WNT9AO14904 365 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 HIP1RO75146 1068 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 RHOBTB1O94844 696 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 HMGA1P17096 107 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 ATF6P18850 670 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 U2AF2P26368 475 aaKnown RBP eCLIP5.48□□□□□ -1.538e-7■■□□□ 11.6
R3HDM1-218ENST00000487294 HOXC13P31276 330 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 CCT6AP40227 531 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 PRPHP41219 470 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 OSTNP61366 133 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 STRN3Q13033 797 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 RUNX3Q13761 415 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 TRIM29Q14134 588 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 PDGFRLQ15198 375 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 SAFBQ15424 915 aaKnown RBP eCLIP5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 ZC3H12BQ5HYM0 836 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 GPR158Q5T848 1215 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 SPATA1Q5VX52 437 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 TMEM150AQ86TG1 271 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 MON1AQ86VX9 555 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 NECAB1Q8N987 351 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 FBXO18Q8NFZ0 1043 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 PCDH19Q8TAB3 1148 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 CCDC26Q8TAB7 109 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 SPPL2BQ8TCT7 592 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 USP13Q92995 863 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 EXOC4Q96A65 974 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 ZBTB45Q96K62 511 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 PGLYRP2Q96PD5 576 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 LLPHQ9BRT6 129 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 RAB34Q9BZG1 259 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 HAPLN2Q9GZV7 340 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 ZCWPW1Q9H0M4 648 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 GKN1Q9NS71 199 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 DDX19AQ9NUU7 478 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 CNOT11Q9UKZ1 510 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 SLC8A2Q9UPR5 921 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 DNM3Q9UQ16 869 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 DERAQ9Y315 318 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 PCDHA9Q9Y5H5 950 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 PCNX2A6NKB5 2137 aa5.48□□□□□ -1.53
R3HDM1-218ENST00000487294 TSC2P49815 1807 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 A0A0B4J269 797 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 E9PMD0 336 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 DDX3XO00571 662 aaKnown RBP eCLIP5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 CDX4O14627 284 aaPredicted RBP5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 OGTO15294 1046 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 SLC16A4O15374 487 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 SLC26A4O43511 780 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 PRICKLE3O43900 615 aaPredicted RBP5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 JAK2O60674 1132 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 APBB3O95704 486 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 CRTAMO95727 393 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 CAVIN2O95810 425 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 OR4Q2P0C623 313 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 CCDC192P0DO97 292 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 CXCL8P10145 99 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 PYGMP11217 842 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 ODC1P11926 461 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 FAHP16930 419 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 ABCD1P33897 745 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 TOB1P50616 345 aaPredicted RBP5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 ZNF131P52739 623 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 GUCY1A3Q02108 690 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 ST3GAL1Q11201 340 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 VEPH1Q14D04 833 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 ZNF174Q15697 407 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 ELF2Q15723 593 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 C2orf27AQ580R0 203 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 SPDYCQ5MJ68 293 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 TTC38Q5R3I4 469 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 DAB2IPQ5VWQ8 1189 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 C9orf57Q5W0N0 161 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 KRT79Q5XKE5 535 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 PMS2CLQ68D20 193 aa5.47□□□□□ -1.53
R3HDM1-218ENST00000487294 ARMCX5Q6P1M9 558 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms