RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 CCL26Q9Y258 94 aa13.61□□□□□ -0.23
VTI1BP1-201ENST00000486325 RANBP2P49792 3224 aaKnown RBP13.61□□□□□ -0.23
VTI1BP1-201ENST00000486325 ILVBLA1L0T0 632 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 C5orf60A6NFR6 353 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 DFFAO00273 331 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 TRANK1O15050 2925 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 KCNN4O15554 427 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 TSPAN3O60637 253 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 RAMP2O60895 175 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 GCATO75600 419 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 IFNB1P01574 187 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 ITIH2P19823 946 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 RBL1P28749 1068 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 ADCY8P40145 1251 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 PPIDQ08752 370 aaKnown RBP13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 AP1B1Q10567 949 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 USP4Q13107 963 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 POLD3Q15054 466 aaPredicted RBP13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 PRKD1Q15139 912 aaPredicted RBP13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 P3H1Q32P28 736 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 TFAP2DQ7Z6R9 452 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 BBS7Q8IWZ6 715 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 CFAP52Q8N1V2 620 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 FAM71DQ8N9W8 422 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 DDI1Q8WTU0 396 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 SEC14L1Q92503 715 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 FATE1Q969F0 183 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 MSLNLQ96KJ4 702 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 VAT1Q99536 393 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 SLC39A8Q9C0K1 460 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 GDF3Q9NR23 364 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 ASIC3Q9UHC3 531 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 TBC1D30Q9Y2I9 924 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 NEU2Q9Y3R4 380 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 MFHAS1Q9Y4C4 1052 aa13.6□□□□□ -0.23
VTI1BP1-201ENST00000486325 NUP205Q92621 2012 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 RASA4BC9J798 803 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 H0Y626 953 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 SOX1O00570 391 aaPredicted RBP13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 TRDMT1O14717 391 aaKnown RBP13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 RASA4O43374 803 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 TBL1XO60907 577 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 TBX10O75333 385 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 ERLIN1O75477 346 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 PRAMEF12O95522 483 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 LTBRP36941 435 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 PAPOLAP51003 745 aaKnown RBP13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 RPS24P62847 133 aaKnown RBP13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 CAV1Q03135 178 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 ELF2Q15723 593 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 ANO4Q32M45 955 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 FAM78AQ5JUQ0 283 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 GET4Q7L5D6 327 aaPredicted RBP13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 PCGF5Q86SE9 256 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 ARHGAP12Q8IWW6 846 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 CCDC13Q8IYE1 715 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 ADGRG2Q8IZP9 1017 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 MICALL1Q8N3F8 863 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 ATPAF2Q8N5M1 289 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 NPWQ8N729 165 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 BPIFB1Q8TDL5 484 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 NSMCE1Q8WV22 266 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 CELF6Q96J87 481 aaKnown RBP13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 LGMNQ99538 433 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 ZFP14Q9HCL3 533 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 WHRNQ9P202 907 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 PAK5Q9P286 719 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 ZNF212Q9UDV6 495 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 CD207Q9UJ71 328 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 TRHDEQ9UKU6 1024 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 RAB21Q9UL25 225 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 HPCAL4Q9UM19 191 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 DOCK4Q8N1I0 1966 aa13.59□□□□□ -0.23
VTI1BP1-201ENST00000486325 BHMG1C9JSJ3 638 aaPredicted RBP13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 SMAPO00193 183 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 MATN3O15232 486 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 OPHN1O60890 802 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 LUC7L3O95232 432 aaKnown RBP13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 MAP3K6O95382 1288 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 RHOCP08134 193 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 TNFRSF8P28908 595 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 IRAK1P51617 712 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 MRPS25P82663 173 aaKnown RBP13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 GNA12Q03113 381 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 DLX2Q07687 328 aaPredicted RBP13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 CALCOCO2Q13137 446 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 SLC12A1Q13621 1099 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 NAA30Q147X3 362 aaPredicted RBP13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 BRD3Q15059 726 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 TMCO4Q5TGY1 634 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 CCNI2Q6ZMN8 369 aaPredicted RBP13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 OTOP3Q7RTS5 596 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 FIBINQ8TAL6 211 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 IRF7Q92985 503 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 MYEOVQ96EZ4 313 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 P2RY11Q96G91 374 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 SNF8Q96H20 258 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 LRCH3Q96II8 777 aa13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 PRICKLE1Q96MT3 831 aaPredicted RBP13.58□□□□□ -0.24
VTI1BP1-201ENST00000486325 FAM161BQ96MY7 647 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms