RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 LINGO4Q6UY18 593 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 NLRP14Q86W24 1093 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 CHPFQ8IZ52 775 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 CCDC112Q8NEF3 446 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 TPCN2Q8NHX9 752 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 USP33Q8TEY7 942 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 LRRN4Q8WUT4 740 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 RAPGEF5Q92565 580 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 CLDN23Q96B33 292 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 HHIPQ96QV1 700 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 CHRDQ9H2X0 955 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 LUC7LQ9NQ29 371 aaKnown RBP12.21□□□□□ -0.46
APTX-227ENST00000485479 ETNK2Q9NVF9 386 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 ELOVL2Q9NXB9 296 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 VPS28Q9UK41 221 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 SLC27A6Q9Y2P4 619 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 ALG6Q9Y672 507 aa12.21□□□□□ -0.46
APTX-227ENST00000485479 CLDN11O75508 207 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 IL12RB1P42701 662 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 LRRC32Q14392 662 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 ZNF234Q14588 700 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 C5orf22Q49AR2 442 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 KIAA1211LQ6NV74 962 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 C1orf228Q6PIY5 440 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 RFX8Q6ZV50 586 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 CCDC117Q8IWD4 279 aaPredicted RBP12.2□□□□□ -0.46
APTX-227ENST00000485479 AHI1Q8N157 1196 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 NPWQ8N729 165 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 KRT35Q92764 455 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 EPAS1Q99814 870 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 CALN1Q9BXU9 219 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 SLC6A17Q9H1V8 727 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 PCDH18Q9HCL0 1135 aa12.2□□□□□ -0.46
APTX-227ENST00000485479 MUC22E2RYF6 1773 aaPredicted RBP12.2□□□□□ -0.46
APTX-227ENST00000485479 GRID2IPA4D2P6 1211 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 NCAM2O15394 837 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 DAPK3O43293 454 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 FTCDO95954 541 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 VAV1P15498 845 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 COL9A1P20849 921 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 AMPD1P23109 780 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 PRKCHP24723 683 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 ARHGAP25P42331 645 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 DMWDQ09019 674 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 KIF5AQ12840 1032 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 KRT81Q14533 505 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 ACAP1Q15027 740 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 HADHQ16836 314 aaKnown RBP12.19□□□□□ -0.46
APTX-227ENST00000485479 PTPRNQ16849 979 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 TTC39BQ5VTQ0 682 aaPredicted RBP12.19□□□□□ -0.46
APTX-227ENST00000485479 HEATR6Q6AI08 1181 aaKnown RBP12.19□□□□□ -0.46
APTX-227ENST00000485479 TMEM92Q6UXU6 159 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 ZNF354CQ86Y25 554 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 NELL2Q99435 816 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 FEM1AQ9BSK4 669 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 SPON2Q9BUD6 331 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 IRX2Q9BZI1 471 aaPredicted RBP12.19□□□□□ -0.46
APTX-227ENST00000485479 KLC2Q9H0B6 622 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 NOL6Q9H6R4 1146 aaKnown RBP12.19□□□□□ -0.46
APTX-227ENST00000485479 NYNRINQ9P2P1 1898 aaKnown RBP12.19□□□□□ -0.46
APTX-227ENST00000485479 LRRD1A4D1F6 860 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 K7ERQ8 282 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 PJA2O43164 708 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 PALMO75781 387 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 MT-CO1P00395 513 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 ERCC2P18074 760 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 POLR2EP19388 210 aaKnown RBP12.19□□□□□ -0.46
APTX-227ENST00000485479 DPYSL2Q16555 572 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 FNDC3BQ53EP0 1204 aaKnown RBP12.19□□□□□ -0.46
APTX-227ENST00000485479 POLNQ7Z5Q5 900 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 MAML2Q8IZL2 1156 aaPredicted RBP12.19□□□□□ -0.46
APTX-227ENST00000485479 DTWD2Q8NBA8 298 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 KCTD6Q8NC69 237 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 RNF25Q96BH1 459 aaPredicted RBP12.19□□□□□ -0.46
APTX-227ENST00000485479 ALG14Q96F25 216 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 CSPG4P5Q96PW8 444 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 PSMB7Q99436 277 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 SLC2A11Q9BYW1 496 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 OSBPL6Q9BZF3 934 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 KIAA1522Q9P206 1035 aaPredicted RBP12.19□□□□□ -0.46
APTX-227ENST00000485479 PPARGC1AQ9UBK2 798 aaKnown RBP12.19□□□□□ -0.46
APTX-227ENST00000485479 SLCO3A1Q9UIG8 710 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 TBC1D30Q9Y2I9 924 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 PPP2R2CQ9Y2T4 447 aa12.19□□□□□ -0.46
APTX-227ENST00000485479 A0A0A0MRY4 1105 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 A0A0A6YYK5 440 aaPredicted RBP12.18□□□□□ -0.46
APTX-227ENST00000485479 CBX4O00257 560 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 BNIP3LO60238 219 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 KRT1P04264 644 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 CCDC175P0C221 793 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 RHOQP17081 205 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 IL4RP24394 825 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 LAMA1P25391 3075 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 MAN1A1P33908 653 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 RPS9P46781 194 aaKnown RBP12.18□□□□□ -0.46
APTX-227ENST00000485479 AIF1P55008 147 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 NRG1Q02297 640 aaPredicted RBP12.18□□□□□ -0.46
APTX-227ENST00000485479 DPYSL3Q14195 570 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 BOLA3Q53S33 107 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 IL31Q6EBC2 164 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms